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rifcsplowo2_01_scaffold_9795

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_9795_1

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comp(105..1202)
DNA (1098bp) protein (366aa)
type 2 DNA topoisomerase 6 subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] id=5048467 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Type 2 DNA topoisomerase 6 subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_00132};; Type II DNA topoisomerase VI subunit A {ECO:0000256|HAMAP-Rule:MF_00132}; TaxID=
type 2 DNA topoisomerase 6 subunit A (EC:5.99.1.3)
rifcsplowo2_01_scaffold_9795_2
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1195..2829)
DNA (1635bp) protein (545aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=CG_Woesearch_02
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] id=5048468 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA topoisomerase VI, subunit B
rifcsplowo2_01_scaffold_9795_3

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comp(2817..3371)
DNA (555bp) protein (185aa)
Ribosomal RNA assembly protein {ECO:0000313|EMBL:KHO50505.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
KH domain-containing protein
rifcsplowo2_01_scaffold_9795_4

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comp(3439..4134)
DNA (696bp) protein (232aa)
Non-specific serine/threonine protein kinase (EC:2.7.11.1)
Uncharacterized protein {ECO:0000313|EMBL:KHO50503.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Serine/threonine protein kinase involved in cell cycle control id=5800010 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_9795_5
GWA1_OP11_46_10, Pacebacteria, Microgenomates, Bacteria

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4626..5576
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZDE1_9BACT
L-threonine 3-dehydrogenase Tax=GWA1_OP11_46_10
NAD-dependent epimerase
rifcsplowo2_01_scaffold_9795_6
R_OP11_Pacebacteria_46_10, Pacebacteria, Microgenomates, Bacteria

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5573..6829
DNA (1257bp) protein (419aa)
8-amino-7-oxononanoate synthase; K00639 glycine C-acetyltransferase [EC:2.3.1.29] Tax=RIFCSPHIGHO2_01_FULL_OP11_Pacebacteria_46_10_curated
BioF; 7-keto-8-aminopelargonate synthetase and related enzyme; K00639 glycine C-acetyltransferase [EC:2.3.1.29] id=5085186 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
class I and II aminotransferase
rifcsplowo2_01_scaffold_9795_7
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6826..8121)
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003664DA9
GdhA3; glutamate dehydrogenase/leucine dehydrogenase
Amino acid dehydrogenase {ECO:0000313|EMBL:EPZ15308.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
rifcsplowo2_01_scaffold_9795_8
CG_Woesearch_01, Woesearchaeota, Archaea

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8430..9680
DNA (1251bp) protein (417aa)
DNA primase Tax=CG_Woesearch_01
DNA primase id=5048471 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_9795_9
unknown

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comp(9698..11164)
DNA (1467bp) protein (489aa)

This feature has no annotations

rifcsplowo2_01_scaffold_9795_10
AR11, Woesearchaeaota, DPANN, Archaea

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comp(11204..12442)
DNA (1239bp) protein (413aa)
TonB family protein Tax=AR11
UPI000297167D related cluster id=3681785 bin=GWF2_OP3_43_52 species=uncultured Flavobacteriia bacterium genus=unknown taxon_order=unknown taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
rifcsplowo2_01_scaffold_9795_11
Paenibacillus curdlanolyticus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(12439..13731)
DNA (1293bp) protein (431aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037B793C
PpiC-type peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:EFM10103.1}; Flags: Precursor;; TaxID=717606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" sour
peptidylprolyl isomerase
rifcsplowo2_01_scaffold_9795_12
CG_Woesearch_03, Woesearchaeota, Archaea

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14018..15799
DNA (1782bp) protein (594aa)
hypothetical protein; K06915 Tax=CG_Woesearch_03
hypothetical protein; K06915 id=5048473 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Displaying 12 items

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