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rifcsplowo2_01_scaffold_18564

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_18564_1

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2..568
DNA (567bp) protein (189aa)
Marine sediment metagenome DNA, contig: S01H1_L04617 {ECO:0000313|EMBL:GAF68774.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Putative transcriptional regulator, AsnC family id=5043628 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_18564_2
unknown

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comp(587..2326)
DNA (1740bp) protein (580aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18564_3
CG_Wirth_01, Wirthbacteria, Bacteria

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2454..4217
DNA (1764bp) protein (588aa)
glycogen [starch] synthase Tax=CG_Wirth_01
Glycogen(Starch) synthase id=2132750 bin=GWD2_CPR2_39_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
glycogen synthase
rifcsplowo2_01_scaffold_18564_4
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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4214..7915
DNA (3702bp) protein (1234aa)
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:AFZ55291.1}; EC=2.7.3.9 {ECO:0000313|EMBL:AFZ55291.1};; EC=2.7.9.2 {ECO:0000313|EMBL:AFZ55291.1};; TaxID=755178 species="Bacteria; Cyanobacteria; Oscilla
phosphoenolpyruvate synthase (EC:2.7.9.2 2.7.3.9)
hypothetical protein n=1 Tax=Anabaena sp. PCC 7108 RepID=UPI000347408D rbh
rifcsplowo2_01_scaffold_18564_5
RHI_OD1_Wolfebacteria_48_16, Wolfebacteria, Parcubacteria, Bacteria

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comp(8240..8674)
DNA (435bp) protein (145aa)
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] Tax=RIFCSPHIGHO2_12_FULL_OD1_Wolfebacteria_48_16_curated
ribose-5-phosphate isomerase B; K01808 ribose 5-phosphate isomerase B [EC:5.3.1.6] id=5803339 bin=OD1_GWC2_34_28 species=ACD37 genus=ACD37 taxon_order=ACD37 taxon_class=ACD37 phylum=OP11 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
ribose-5-phosphate isomerase B
rifcsplowo2_01_scaffold_18564_6
unknown

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comp(8700..9086)
DNA (387bp) protein (129aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18564_7
BJP_IG2069_Anaerolineales_43_63, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

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comp(9088..9936)
DNA (849bp) protein (283aa)
alias=gwa2_scaffold_1344_69 id=18248260 bin=AR5_curated_draft species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
ATPase AAA
Tax=BJP_IG2069_Anaerolineales_43_63
rifcsplowo2_01_scaffold_18564_8
unknown

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comp(9938..10078)
DNA (141bp) protein (47aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18564_9
unknown

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comp(10056..10718)
DNA (663bp) protein (221aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18564_10
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(10741..10959)
DNA (219bp) protein (73aa)
Tax=CG_Woesearch_03
rifcsplowo2_01_scaffold_18564_11
RBG_16_KB1_OP1_55_9_curated, KB1, Bacteria

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11063..12490
DNA (1428bp) protein (476aa)
DNA methylase N-4/N-6 Tax=RBG_16_KB1_OP1_55_9_curated
DNA methylase N-4/N-6 id=4944168 bin=GWC2_Planctomycetes_45_44 species=Amycolatopsis vancoresmycina genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Planctomycetes_45_44 organism_group=Planctomycetes organism_desc=Novel; good
DNA methylase N-4/N-6
rifcsplowo2_01_scaffold_18564_12
AR18, Woesearchaeaota, DPANN, Archaea

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comp(12483..13022)
DNA (540bp) protein (180aa)
hypothetical protein
Uncharacterized protein id=5049558 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein Tax=AR18
rifcsplowo2_01_scaffold_18564_13
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(13012..13716)
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QCZ5_METFO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF85866.1}; TaxID=1204725 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacte
rifcsplowo2_01_scaffold_18564_14
AR4, Woesearchaeaota, DPANN, Archaea

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comp(13713..14375)
DNA (663bp) protein (221aa)
radC; DNA repair protein RadC; K03630 DNA repair protein RadC id=5044593 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
radC; DNA repair protein RadC; K03630 DNA repair protein RadC Tax=AR4
radC; DNA repair protein RadC
rifcsplowo2_01_scaffold_18564_15
GWA2_OP3X_41_15_curated, OP3X, Bacteria

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14473..14994
DNA (522bp) protein (174aa)
hypothetical protein Tax=GWA2_OP3X_41_15_curated
hypothetical protein id=16923393 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
dephospho-CoA kinase, CoaE
rifcsplowo2_01_scaffold_18564_16
Homo sapiens, Homo, Primates, Mammalia, Chordata, Metazoa

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comp(15062..18031)
DNA (2970bp) protein (990aa)
Trichohyalin n=3 Tax=Homo sapiens RepID=TRHY_HUMAN
Trichohyalin; TaxID=9606 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo.;" source="
hypothetical protein
Displaying 16 items

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