ggKbase home page

rifcsplowo2_01_scaffold_2067

Search features with annotation key words

Displaying items 1-30 of 72 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2067_1

Not on your lists

151..600
DNA (450bp) protein (150aa)
Putative uncharacterized protein id=5046897 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45843.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_2

Not on your lists

687..1073
DNA (387bp) protein (129aa)
id=5046898 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45844.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_3

Not on your lists

1151..1720
DNA (570bp) protein (190aa)
id=5046899 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45845.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_4

Not on your lists

1711..4272
DNA (2562bp) protein (854aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO45846.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
id=5046900 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
rifcsplowo2_01_scaffold_2067_5

Not on your lists

4263..5279
DNA (1017bp) protein (339aa)
id=5046901 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45847.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_6

Not on your lists

5526..7010
DNA (1485bp) protein (495aa)
DEAD/DEAH box helicase-like protein id=5046902 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
DEAD/DEAH box helicase-like protein {ECO:0000313|EMBL:KHO45848.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
DNA/RNA helicase, superfamily II
rifcsplowo2_01_scaffold_2067_7

Not on your lists

7040..7657
DNA (618bp) protein (206aa)
hypothetical protein
id=5046903 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45849.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_8

Not on your lists

7739..8632
DNA (894bp) protein (298aa)
hypothetical protein id=5046904 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45850.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_2067_9

Not on your lists

8831..10051
DNA (1221bp) protein (407aa)
hypothetical protein id=5046905 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45851.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_2067_10

Not on your lists

10063..10284
DNA (222bp) protein (74aa)
id=5046906 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45852.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_11

Not on your lists

comp(10350..11582)
DNA (1233bp) protein (411aa)
PfkB family carbohydrate kinase id=5046907 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
PfkB family carbohydrate kinase {ECO:0000313|EMBL:KHO45853.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
putative PfkB family carbohydrate kinase
rifcsplowo2_01_scaffold_2067_12

Not on your lists


11650..12894
DNA (1245bp) protein (415aa)
cca; tRNA adenylyltransferase (CCA-adding enzyme) (EC:2.7.7.72); K07558 tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72] id=5046908 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA nucleotidyltransferase CCA-adding enzyme
rifcsplowo2_01_scaffold_2067_13

Not on your lists

12891..13484
DNA (594bp) protein (198aa)
Haloacid dehalogenase-type hydrolase id=5046909 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Haloacid dehalogenase-type hydrolase {ECO:0000313|EMBL:KHO45855.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_14

Not on your lists

13960..14508
DNA (549bp) protein (183aa)
hypothetical protein id=5046910 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45856.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
PA-phosphatase-like phosphoesterase
rifcsplowo2_01_scaffold_2067_15

Not on your lists

14557..15141
DNA (585bp) protein (195aa)
hypothetical protein id=5046911 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45857.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_2067_16

Not on your lists

15227..15466
DNA (240bp) protein (80aa)
id=5046912 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45858.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_17

Not on your lists

15530..16408
DNA (879bp) protein (293aa)
id=5046913 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45859.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_18

Not on your lists

comp(16426..16836)
DNA (411bp) protein (137aa)
id=5046914 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45860.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_19

Not on your lists

comp(16838..17377)
DNA (540bp) protein (180aa)
hypothetical protein
id=5046915 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45861.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_20

Not on your lists

17568..17849
DNA (282bp) protein (94aa)
id=5046916 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45862.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_21

Not on your lists

comp(17918..18403)
DNA (486bp) protein (162aa)
HEPN domain-containing protein id=5046917 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
HEPN protein {ECO:0000313|EMBL:KHO45863.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_2067_22

Not on your lists

comp(18345..18932)
DNA (588bp) protein (196aa)
hypothetical protein id=5046918 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45864.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_2067_23

Not on your lists

comp(18995..21850)
DNA (2856bp) protein (952aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO45865.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein id=5046919 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
hypothetical protein
rifcsplowo2_01_scaffold_2067_24

Not on your lists

22008..23003
DNA (996bp) protein (332aa)
H/ACA RNA-protein complex component Cbf5p (EC:5.4.99.12); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] id=5046920 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
putative tRNA pseudouridine synthase B
rifcsplowo2_01_scaffold_2067_25

Not on your lists

comp(23022..24149)
DNA (1128bp) protein (376aa)
id=5046921 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45867.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_26

Not on your lists

comp(24151..24480)
DNA (330bp) protein (110aa)
hypothetical protein; K09728 hypothetical protein id=5046922 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45868.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Uncharacterized protein conserved in archaea
rifcsplowo2_01_scaffold_2067_27

Not on your lists

24814..26076
DNA (1263bp) protein (421aa)
id=5046923 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO45869.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2067_28

Not on your lists

comp(26150..26407)
DNA (258bp) protein (86aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=5046924 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_2067_29

Not on your lists

comp(26418..27185)
DNA (768bp) protein (256aa)
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 id=5046925 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Exosome complex component RRP42 {ECO:0000313|EMBL:KHO45871.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Ribosomal RNA-processing protein RRP42
rifcsplowo2_01_scaffold_2067_30

Not on your lists

comp(27178..27945)
DNA (768bp) protein (256aa)
Rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 id=5046926 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Exosome complex exonuclease Rrp41, exosome complex component RRP41 {ECO:0000313|EMBL:KHO45872.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
exosome complex exonuclease Rrp41
Displaying items 1-30 of 72 in total

View Taxonomy