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rifcsplowo2_01_scaffold_78

Search features with annotation key words

Displaying items 301-318 of 318 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_78_301
AR4, Woesearchaeaota, DPANN, Archaea

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311311..311796
DNA (486bp) protein (162aa)
id=5048388 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsplowo2_01_scaffold_78_302
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

311768..312229
DNA (462bp) protein (154aa)
hypothetical protein
id=5103666 Tax=CG_Woesearch_03
id=5103666 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_78_303

Not on your lists

312326..312919
DNA (594bp) protein (198aa)
id=5048391 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45063.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_78_304

Not on your lists

comp(312923..314269)
DNA (1347bp) protein (449aa)
CapK related-protein id=5043609 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
CapK related-protein {ECO:0000313|EMBL:KHO46585.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
capsular polysaccharide biosynthesis protein
rifcsplowo2_01_scaffold_78_305
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(314334..314822)
DNA (489bp) protein (163aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0APD9_IGNAJ
oxidoreductase
rifcsplowo2_01_scaffold_78_306
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

314875..315555
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362D490
Bacterioopsin activator HTH domain-containing protein Tax=RBG_13_Pacearchaeota_36_9_curated
transcription regulator, containing DNA-binding HTH domain
rifcsplowo2_01_scaffold_78_307
unknown

Not on your lists

315678..316277
DNA (600bp) protein (200aa)

This feature has no annotations

rifcsplowo2_01_scaffold_78_308

Not on your lists


316597..317133
DNA (537bp) protein (179aa)
Marine sediment metagenome DNA, contig: S01H1_L06460 {ECO:0000313|EMBL:GAF76521.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S13P id=5799893 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S13
rifcsplowo2_01_scaffold_78_309
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


317144..317881
DNA (738bp) protein (246aa)
30S ribosomal protein S4 Tax=RBG_13_Woesearchaeota_36_6_curated
rps4p; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 id=5051520 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
30S ribosomal protein S4P
rifcsplowo2_01_scaffold_78_310

Not on your lists


317878..318303
DNA (426bp) protein (142aa)
Marine sediment metagenome DNA, contig: S01H4_S05167 {ECO:0000313|EMBL:GAH02536.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11P
rifcsplowo2_01_scaffold_78_311
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

318304..319089
DNA (786bp) protein (262aa)
DNA-directed RNA polymerase subunit D id=5799890 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit D Tax=AR15
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_78_312
unknown

Not on your lists

319416..319997
DNA (582bp) protein (194aa)

This feature has no annotations

rifcsplowo2_01_scaffold_78_313
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


320022..320357
DNA (336bp) protein (112aa)
50S ribosomal protein L18e id=5799889 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L18e Tax=AR15
50S ribosomal protein L18e
rifcsplowo2_01_scaffold_78_314

Not on your lists


320367..320792
DNA (426bp) protein (142aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S00916 {ECO:0000313|EMBL:GAF93287.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
50S ribosomal protein L13P
rifcsplowo2_01_scaffold_78_315
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


320789..321187
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZF5_METFV id=5103678 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Woesearch_02
30S ribosomal protein S9
rifcsplowo2_01_scaffold_78_316
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists


321206..321403
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=RBG_13_Woesearchaeota_36_6_curated
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit N
rifcsplowo2_01_scaffold_78_317
unknown

Not on your lists

321468..322106
DNA (639bp) protein (213aa)

This feature has no annotations

rifcsplowo2_01_scaffold_78_318
unknown

Not on your lists

322119..322826
DNA (708bp) protein (236aa)

This feature has no annotations

Displaying items 301-318 of 318 in total

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