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rifcsplowo2_01_scaffold_78

Search features with annotation key words

Displaying items 241-270 of 318 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_78_241

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254873..256354
DNA (1482bp) protein (494aa)
leucyl aminopeptidase; K01255 leucyl aminopeptidase [EC:3.4.11.1] id=5046306 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
pepA; leucyl aminopeptidase (EC:3.4.11.1)
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1579365 spec
rifcsplowo2_01_scaffold_78_242
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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256563..257972
DNA (1410bp) protein (470aa)
FeS assembly protein SufB {ECO:0000313|EMBL:KKQ17612.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB id=5048371 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
FeS assembly protein SufB
rifcsplowo2_01_scaffold_78_243

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258022..259320
DNA (1299bp) protein (433aa)
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD id=5046303 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Fe-S cluster assembly protein SufD {ECO:0000313|EMBL:KHO46104.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
FeS assembly protein SufD
rifcsplowo2_01_scaffold_78_244

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259322..260554
DNA (1233bp) protein (411aa)
SufS subfamily cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] id=5046302 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
cysteine desulfurase SufS
rifcsplowo2_01_scaffold_78_245

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260557..261012
DNA (456bp) protein (152aa)
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins id=5046301 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Nitrogen fixation protein NifU {ECO:0000313|EMBL:KHO46102.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
NifU family SUF system FeS assembly protein
rifcsplowo2_01_scaffold_78_246

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261069..261836
DNA (768bp) protein (256aa)
sufC; putative ATP-dependent transporter SufC; K09013 Fe-S cluster assembly ATP-binding protein id=5046300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46101.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
sufC; putative ATP-dependent transporter SufC
rifcsplowo2_01_scaffold_78_247

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comp(261889..262347)
DNA (459bp) protein (153aa)
id=5046299 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46100.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_248

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comp(262368..262721)
DNA (354bp) protein (118aa)
dihydropteroate synthase id=5046298 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Dihydropteroate synthase {ECO:0000313|EMBL:KHO46099.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
dihydropteroate synthase
rifcsplowo2_01_scaffold_78_249

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comp(262815..265172)
DNA (2358bp) protein (786aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
polB; DNA polymerase II (EC:2.7.7.7); K02336 DNA polymerase II [EC:2.7.7.7] id=5046297 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
hypothetical protein
rifcsplowo2_01_scaffold_78_250

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comp(265566..266240)
DNA (675bp) protein (225aa)
hypothetical protein
id=5046296 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46097.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_251

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266265..267707
DNA (1443bp) protein (481aa)
citrate transporter id=5046295 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Citrate transporter {ECO:0000313|EMBL:KHO46096.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
citrate transporter
rifcsplowo2_01_scaffold_78_252

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comp(267762..268244)
DNA (483bp) protein (161aa)
folA; dihydrofolate reductase (EC:1.5.1.3); K00287 dihydrofolate reductase [EC:1.5.1.3] id=5046294 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Dihydrofolate reductase {ECO:0000313|EMBL:KHO46095.1}; EC=1.5.1.3 {ECO:0000313|EMBL:KHO46095.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
folA; dihydrofolate reductase (EC:1.5.1.3)
rifcsplowo2_01_scaffold_78_253

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comp(268279..269124)
DNA (846bp) protein (282aa)
thymidylate synthase (EC:2.1.1.45); K00560 thymidylate synthase [EC:2.1.1.45] id=5046293 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Thymidylate synthase {ECO:0000313|EMBL:KHO46094.1}; EC=2.1.1.45 {ECO:0000313|EMBL:KHO46094.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
thymidylate synthase (EC:2.1.1.45)
rifcsplowo2_01_scaffold_78_254

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comp(269411..270190)
DNA (780bp) protein (260aa)
hypothetical protein id=5046292 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46093.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_78_255

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270300..270938
DNA (639bp) protein (213aa)
hypothetical protein id=5046291 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46092.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
conserved membrane protein of unknown function
rifcsplowo2_01_scaffold_78_256

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comp(270962..271285)
DNA (324bp) protein (108aa)
id=5046290 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46091.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_257

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comp(271443..273539)
DNA (2097bp) protein (699aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO46090.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Cell surface protein; K07114 uncharacterized protein id=5046289 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Cell surface protein
rifcsplowo2_01_scaffold_78_258

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comp(273631..273936)
DNA (306bp) protein (102aa)
id=5046288 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46089.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_259

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comp(274008..274751)
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp; K04802 proliferating cell nuclear antigen id=5046287 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1579365 species="Arch
DNA polymerase sliding clamp
rifcsplowo2_01_scaffold_78_260

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comp(274860..276197)
DNA (1338bp) protein (446aa)
beta-lactamase domain-containing protein; K07021 id=5046285 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46086.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
RNA-metabolising metallo-beta-lactamase
rifcsplowo2_01_scaffold_78_261

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comp(276246..276593)
DNA (348bp) protein (116aa)
id=5046284 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46085.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_262

Not on your lists

comp(276993..277238)
DNA (246bp) protein (82aa)
id=5046283 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46084.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_263

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277430..277828
DNA (399bp) protein (133aa)
id=5046282 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46083.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_264

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278343..279077
DNA (735bp) protein (245aa)
hypothetical protein id=5046281 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46082.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_78_265

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279043..279633
DNA (591bp) protein (197aa)
resolvase-like protein id=5046280 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Resolvase-like protein {ECO:0000313|EMBL:KHO46081.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
resolvase-like protein
rifcsplowo2_01_scaffold_78_266

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comp(279704..280639)
DNA (936bp) protein (312aa)
id=5046279 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46080.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_267

Not on your lists

280749..280967
DNA (219bp) protein (73aa)
hypothetical protein
id=5046278 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46079.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_268

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comp(281330..281902)
DNA (573bp) protein (191aa)
id=5046277 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46078.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_269

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comp(281908..282606)
DNA (699bp) protein (233aa)
hypothetical protein id=5046276 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46077.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
bacteriophage protein gp37
rifcsplowo2_01_scaffold_78_270

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comp(282693..282869)
DNA (177bp) protein (59aa)
id=5046275 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46076.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Displaying items 241-270 of 318 in total

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