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rifcsplowo2_01_scaffold_78

Search features with annotation key words

Displaying items 121-150 of 318 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_78_121

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comp(130705..130809)
DNA (105bp) protein (35aa)
id=5042285 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46783.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_122

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comp(130757..132046)
DNA (1290bp) protein (430aa)
glutamyl-tRNA(Gln) amidotransferase subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] id=5042286 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|RuleBase:RU004457}; EC=6.3.5.- {ECO:0000256|RuleBase:RU004457};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Glutamyl-tRNA(Gln) amidotransferase subunit D
rifcsplowo2_01_scaffold_78_123

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comp(132124..133005)
DNA (882bp) protein (294aa)
phosphoribosyl transferase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] id=5042287 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KHO46785.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KHO46785.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
rifcsplowo2_01_scaffold_78_124

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comp(133089..135515)
DNA (2427bp) protein (809aa)
hypothetical protein; K13525 transitional endoplasmic reticulum ATPase id=5042288 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46786.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
AAA family ATPase, CDC48 subfamily
rifcsplowo2_01_scaffold_78_125

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comp(135608..136015)
DNA (408bp) protein (136aa)
hypothetical protein id=5042289 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46787.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_78_126

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136078..136860
DNA (783bp) protein (261aa)
yabD; TatD-related deoxyribonuclease YabD; K03424 TatD DNase family protein [EC:3.1.21.-] id=5042290 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
TatD DNase family protein {ECO:0000313|EMBL:KHO46788.1}; EC=3.1.21.- {ECO:0000313|EMBL:KHO46788.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Hydrolase, TatD family
rifcsplowo2_01_scaffold_78_127

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137241..137906
DNA (666bp) protein (222aa)
hypothetical protein
coiled-coil id=5042291 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46789.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_128

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138002..138949
DNA (948bp) protein (316aa)
Thioredoxin reductase (trxB-3); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=5042292 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Thioredoxin reductase NADPH {ECO:0000313|EMBL:KHO46790.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KHO46790.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Thioredoxin reductase TrxB-3
rifcsplowo2_01_scaffold_78_129

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comp(138980..139765)
DNA (786bp) protein (262aa)
seg id=5042293 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46791.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_130

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comp(139909..140220)
DNA (312bp) protein (104aa)
transmembrane_regions id=5042294 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46792.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_131

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comp(140242..140799)
DNA (558bp) protein (186aa)
id=5042295 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46793.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_132

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140937..141197
DNA (261bp) protein (87aa)
cadC; transcriptional regulator; K03892 ArsR family transcriptional regulator id=5042296 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHO46794.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
transcriptional regulator
rifcsplowo2_01_scaffold_78_133

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141194..141430
DNA (237bp) protein (79aa)
redox-active disulfide protein 2 id=5042297 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thioredoxin {ECO:0000256|PIRNR:PIRNR037031}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
redox-active disulfide protein 2
rifcsplowo2_01_scaffold_78_134

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141444..142559
DNA (1116bp) protein (372aa)
permease; K07089 id=5042298 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
Uncharacterized protein {ECO:0000313|EMBL:KHO46796.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
permease
rifcsplowo2_01_scaffold_78_135

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143079..143381
DNA (303bp) protein (101aa)
transmembrane_regions id=5042299 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46797.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_78_136

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143640..144617
DNA (978bp) protein (326aa)
50S ribosomal protein L3; K02906 large subunit ribosomal protein L3 id=5042300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
50S ribosomal protein L3 {ECO:0000256|SAAS:SAAS00023038}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L3
rifcsplowo2_01_scaffold_78_137

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144631..145596
DNA (966bp) protein (322aa)
rpl4lp; 50S ribosomal protein L4P; K02930 large subunit ribosomal protein L4e id=5042301 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
50S ribosomal protein L4P, large subunit ribosomal protein L4e {ECO:0000313|EMBL:KHO46799.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L4
rifcsplowo2_01_scaffold_78_138

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145593..145859
DNA (267bp) protein (89aa)
rplW; 50S ribosomal protein L23; K02892 large subunit ribosomal protein L23 id=5042302 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L23 {ECO:0000313|EMBL:KHO46800.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L23P
rifcsplowo2_01_scaffold_78_139

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145948..146661
DNA (714bp) protein (238aa)
50S ribosomal protein L2; K02886 large subunit ribosomal protein L2 id=5042303 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L2
rifcsplowo2_01_scaffold_78_140

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146690..147076
DNA (387bp) protein (129aa)
rps19p; 30S ribosomal protein S19; K02965 small subunit ribosomal protein S19 id=5042304 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rps19p; 30S ribosomal protein S19
rifcsplowo2_01_scaffold_78_141

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147089..147616
DNA (528bp) protein (176aa)
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22 id=5042305 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ribosomal protein L22/L17
rifcsplowo2_01_scaffold_78_142

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147613..148413
DNA (801bp) protein (267aa)
rps3p; 30S ribosomal protein S3P; K02982 small subunit ribosomal protein S3 id=5042306 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S3
rifcsplowo2_01_scaffold_78_143

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148425..148628
DNA (204bp) protein (68aa)
50S ribosomal protein L29; K02904 large subunit ribosomal protein L29 id=5042307 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L29
rifcsplowo2_01_scaffold_78_144

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148625..148933
DNA (309bp) protein (103aa)
translation initiation factor 1 (eIF-1/SUI1); K03113 translation initiation factor 1 id=5042308 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein translation factor SUI1 homolog {ECO:0000256|HAMAP-Rule:MF_00604, ECO:0000256|PIRNR:PIRNR037511}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
translation initiation factor 1 (eIF-1/SUI1)
rifcsplowo2_01_scaffold_78_145

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148944..149216
DNA (273bp) protein (91aa)
ribonuclease P protein component 1; K03538 ribonuclease P protein subunit POP4 [EC:3.1.26.5] id=5042309 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P
rifcsplowo2_01_scaffold_78_146

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149241..149735
DNA (495bp) protein (165aa)
rps17p; 30S ribosomal protein S17; K02961 small subunit ribosomal protein S17 id=5042310 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
30S ribosomal protein S17P {ECO:0000256|HAMAP-Rule:MF_01345}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S17
rifcsplowo2_01_scaffold_78_147

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149741..150142
DNA (402bp) protein (134aa)
rpl14p; 50S ribosomal protein L14P; K02874 large subunit ribosomal protein L14 id=5042311 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L14P
rifcsplowo2_01_scaffold_78_148

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150167..150550
DNA (384bp) protein (128aa)
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24 id=5042312 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Ribosomal protein L24P
rifcsplowo2_01_scaffold_78_149

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150547..151239
DNA (693bp) protein (231aa)
30S ribosomal protein S4E; K02987 small subunit ribosomal protein S4e id=5042313 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S4E
rifcsplowo2_01_scaffold_78_150

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151254..151769
DNA (516bp) protein (172aa)
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 id=5042314 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
50S ribosomal protein L5
Displaying items 121-150 of 318 in total

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