ggKbase home page

rifcsplowo2_01_scaffold_16487

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_16487_1

Not on your lists

53..283
-----------------
DNA (231bp)
protein (77aa)
hypothetical protein id=5046756 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45944.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_16487_2

Not on your lists

307..588
-----------------
DNA (282bp)
protein (94aa)
hypothetical protein id=5046755 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45943.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_16487_3

Not on your lists

comp(593..1405)
-----------------
DNA (813bp)
protein (271aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Ribonuclease id=5800785 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribonuclease HIII
rifcsplowo2_01_scaffold_16487_4
unknown

Not on your lists

comp(1627..2694)
-----------------
DNA (1068bp)
protein (356aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16487_5
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(2687..3700)
-----------------
DNA (1014bp)
protein (338aa)
alanine dehydrogenase; K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=CG_Elusi_01
Alanine dehydrogenase n=1 Tax=Flavobacterium sp. F52 RepID=J1KMY8_9FLAO
alanine dehydrogenase
rifcsplowo2_01_scaffold_16487_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3736..4422)
-----------------
DNA (687bp)
protein (229aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Woesearch_02
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=5044051 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ribonuclease HII
rifcsplowo2_01_scaffold_16487_7
unknown

Not on your lists

4507..4611
-----------------
DNA (105bp)
protein (35aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16487_8
unknown

Not on your lists

comp(4704..4880)
-----------------
DNA (177bp)
protein (59aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16487_9
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4904..5194)
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein Tax=AR17
Putative uncharacterized protein id=5045885 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
putative transcriptional regulator
rifcsplowo2_01_scaffold_16487_10

Not on your lists

comp(5196..5903)
-----------------
DNA (708bp)
protein (236aa)
id=5045884 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46229.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_16487_11
unknown

Not on your lists

6156..6278
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16487_12
unknown

Not on your lists

6546..6725
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16487_13
unknown

Not on your lists

6741..7277
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16487_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

7600..9714
-----------------
DNA (2115bp)
protein (705aa)
Xylose isomerase-like, TIM barrel domain id=5043952 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Xylose isomerase-like, TIM barrel domain Tax=AR4
rifcsplowo2_01_scaffold_16487_15
unknown

Not on your lists

9731..9838
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16487_16
unknown

Not on your lists

9944..10270
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

rifcsplowo2_01_scaffold_16487_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10297..11013)
-----------------
DNA (717bp)
protein (239aa)
Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_16487_18
R_Gammaproteobacteria_61_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11040..12428)
-----------------
DNA (1389bp)
protein (463aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_61_13_curated
hypothetical protein id=5084127 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
rifcsplowo2_01_scaffold_16487_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(12430..14064)
-----------------
DNA (1635bp)
protein (545aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein id=5084127 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
hypothetical protein
rifcsplowo2_01_scaffold_16487_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14249..15748)
-----------------
DNA (1500bp)
protein (500aa)
Putative uncharacterized protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5043950 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_16487_21
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15824..16468)
-----------------
DNA (645bp)
protein (215aa)
Methyltransferase type 11 n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2AWJ5_STRRD
type 11 methyltransferase
Methyltransferase type 11 {ECO:0000313|EMBL:ACZ86991.1}; TaxID=479432 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Streptosporangium.;" source="Streptosporangium roseu
rifcsplowo2_01_scaffold_16487_22
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

comp(16465..17589)
-----------------
DNA (1125bp)
protein (375aa)
Major facilitator superfamily Tax=RBG_13_OP11_40_15_curated
hypothetical protein id=8366 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
arabinose efflux permease family protein
Displaying 22 items

View Taxonomy