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rifcsplowo2_01_scaffold_11171

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_11171_1
Candidatus Omnitrophus sp. SKK-01, Candidatus Omnitrophus, Omnitrophica, Bacteria

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104..2407
DNA (2304bp) protein (768aa)
Type I site-specific restriction-modification system, R (Restriction) subunit {ECO:0000313|EMBL:KJJ83527.1}; TaxID=1609969 species="Bacteria; Omnitrophica; Candidatus Omnitrophus.;" source="Candidatus
EcoEI R domain protein id=3626639 bin=GWC2_Clostridiales_40_7 species=ACD28 genus=ACD28 taxon_order=ACD28 taxon_class=ACD28 phylum=PER tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
EcoEI R domain protein
rifcsplowo2_01_scaffold_11171_2
AR9, Woesearchaeaota, DPANN, Archaea

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comp(2661..3491)
DNA (831bp) protein (277aa)
phosphoribosylpyrophosphate synthetase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=AR9
phosphoribosylpyrophosphate synthetase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] id=5049551 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
rifcsplowo2_01_scaffold_11171_3
AR18, Woesearchaeaota, DPANN, Archaea

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3591..5222
DNA (1632bp) protein (544aa)
lysK; lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5046890 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
lysK; lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] Tax=AR18
lysyl-tRNA synthetase
rifcsplowo2_01_scaffold_11171_4
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(5243..6499)
DNA (1257bp) protein (419aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HHD2_METFS
putative ATPase (AAA+ superfamily) Tax=CG_Woesearch_01
putative ATPase (AAA+ superfamily)
rifcsplowo2_01_scaffold_11171_5
unknown

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6936..7163
DNA (228bp) protein (76aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11171_6
GWF2_OD1_38_8, Parcubacteria, Bacteria

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7297..7644
DNA (348bp) protein (116aa)
Sucraseferredoxin family protein {ECO:0000313|EMBL:KKQ86348.1}; TaxID=1618961 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_38_8.;"
id=5049648 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_11171_7
AR11, Woesearchaeaota, DPANN, Archaea

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7693..7953
DNA (261bp) protein (87aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CA56B
Transcriptional regulator, AbrB family Tax=AR11
transcriptional regulator, AbrB family
rifcsplowo2_01_scaffold_11171_8

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7999..8358
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037058C3
Uncharacterized protein {ECO:0000313|EMBL:KHO46002.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
toxin-antitoxin system toxin component, PIN family
rifcsplowo2_01_scaffold_11171_9
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(8369..8836)
DNA (468bp) protein (156aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
rifcsplowo2_01_scaffold_11171_10
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(8839..9270)
DNA (432bp) protein (144aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
rifcsplowo2_01_scaffold_11171_11
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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comp(9282..9728)
DNA (447bp) protein (149aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
rifcsplowo2_01_scaffold_11171_12
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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9922..10545
DNA (624bp) protein (208aa)
deoxyribonuclease V (EC:3.1.21.7); K05982 deoxyribonuclease V [EC:3.1.21.7] Tax=RBG_13_Woesearchaeota_36_6_curated
deoxyinosine 3'endonuclease (endonuclease V); K05982 deoxyribonuclease V [EC:3.1.21.7] id=5041663 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
endonuclease V (EC:3.1.21.7)
rifcsplowo2_01_scaffold_11171_13
unknown

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comp(10576..10920)
DNA (345bp) protein (115aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11171_14
unknown

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comp(11005..11268)
DNA (264bp) protein (88aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11171_15
AR15, Woesearchaeaota, DPANN, Archaea

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11397..14801
DNA (3405bp) protein (1135aa)
Chromosome partition protein Smc id=5800619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Chromosome partition protein Smc Tax=AR15
chromosome segregation protein SMC
rifcsplowo2_01_scaffold_11171_16
R_OD1_Yanofskybacteria_43_42, Yanofskybacteria, Parcubacteria, Bacteria

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15275..15940
DNA (666bp) protein (222aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46] Tax=RIFCSPHIGHO2_01_FULL_OD1_Yanofskybacteria_43_42_curated
glpQ; putative glycerophosphodiester phosphodiesterase (EC:3.1.4.46)
Putative glycerophosphodiester phosphodiesterase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W287_UNCMA
rifcsplowo2_01_scaffold_11171_17
CG_Woesearch_01, Woesearchaeota, Archaea

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15991..16506
DNA (516bp) protein (172aa)
rpl10e; 50S ribosomal protein L10e; K02866 large subunit ribosomal protein L10e Tax=CG_Woesearch_01
50S ribosomal protein L16; K02866 large subunit ribosomal protein L10e id=5044620 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L10ae
rifcsplowo2_01_scaffold_11171_18
unknown

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comp(16541..17188)
DNA (648bp) protein (216aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11171_19

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comp(17283..18068)
DNA (786bp) protein (262aa)
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5045823 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Helicase {ECO:0000313|EMBL:KHO46436.1}; EC=3.6.4.- {ECO:0000313|EMBL:KHO46436.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ski2-like helicase
rifcsplowo2_01_scaffold_11171_20
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18136..18894)
DNA (759bp) protein (253aa)
helicase (EC:3.6.4.-)
Superfamily II helicase id=5800426 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Superfamily II helicase Tax=AR15
rifcsplowo2_01_scaffold_11171_21
RIFOXYC1_FULL_RIF_OD1_03_37_11_curated, RIF-OD1-3, Parcubacteria, Bacteria

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comp(19028..19942)
DNA (915bp) protein (305aa)
D-3-phosphoglycerate dehydrogenase; K00058 D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95] Tax=RIFOXYC1_FULL_RIF_OD1_03_37_11_curated
hprA; glycerate dehydrogenase (EC:1.1.1.29)
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding n=1 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KSF3_9BACT
rifcsplowo2_01_scaffold_11171_22
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(20014..22410)
DNA (2397bp) protein (799aa)
UPI0003D1A86A related cluster n=1 Tax=unknown RepID=UPI0003D1A86A
subtilisin-like serine protease Tax=CG_Woesearch_02
subtilisin-like serine protease
rifcsplowo2_01_scaffold_11171_23

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comp(22485..23495)
DNA (1011bp) protein (337aa)
EF hand domain/PKD protein {ECO:0000313|EMBL:KHO50140.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Ig family protein id=3276172 bin=GWF2_Lentisphaerae_57_35 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Ig family protein
rifcsplowo2_01_scaffold_11171_24
RIFOXYB1_FULL_OD1_Kaiserbacteria_46_14_curated, Kaiserbacteria, Parcubacteria, Bacteria

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comp(23717..24301)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Emiliania huxleyi CCMP1516 RepID=R1BM60_EMIHU
Os06g0192900; Similar to tac7077. Tax=RIFOXYB1_FULL_OD1_Kaiserbacteria_46_14_curated
hypothetical protein
rifcsplowo2_01_scaffold_11171_25
unknown

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comp(24385..24975)
DNA (591bp) protein (197aa)

This feature has no annotations

rifcsplowo2_01_scaffold_11171_26
unknown

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comp(25232..26701)
DNA (1470bp) protein (490aa)
deoxynucleoside kinase (EC:2.7.1.-)
rifcsplowo2_01_scaffold_11171_27
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(26752..27477)
DNA (726bp) protein (242aa)
Deoxyguanosine kinase/deoxyadenosine kinase subunit n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q08X46_STIAD
deoxynucleoside kinase Tax=RIFCSPHIGHO2_02_FULL_Gammaproteobacteria_42_13_curated
deoxynucleoside kinase family protein
rifcsplowo2_01_scaffold_11171_28

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27600..29060
DNA (1461bp) protein (487aa)
Oxidative cyclase id=5800341 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Oxidative cyclase {ECO:0000313|EMBL:AJF61672.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
oxidative cyclase
rifcsplowo2_01_scaffold_11171_29
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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29185..29391
DNA (207bp) protein (69aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_11171_30
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

29388..29720
DNA (333bp) protein (111aa)
id=4744551 Tax=RBG_13_Pacearchaeota_36_9_curated
id=4744551 bin=GWC2_OP3_44_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Displaying items 1-30 of 32 in total

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