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rifcsplowo2_01_scaffold_12526

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_12526_1
CG_Micra_05, Micraarchaeota, Archaea

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2..535
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1ARK7_9EURY
hypothetical protein Tax=CG_Micra_05
hypothetical protein
rifcsplowo2_01_scaffold_12526_2
unknown

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651..803
DNA (153bp) protein (51aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12526_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(729..1436)
DNA (708bp) protein (236aa)
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
TrmB family transcriptional regulator id=5044157 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transcriptional regulator TrmB
rifcsplowo2_01_scaffold_12526_4
unknown

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1620..2471
DNA (852bp) protein (284aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12526_5
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(2504..2980)
DNA (477bp) protein (159aa)
Putative peroxiredoxin ygaF n=1 Tax=Microcystis sp. T1-4 RepID=I4IIA7_9CHRO
Peroxiredoxin Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
bacterioferritin comigratory protein
rifcsplowo2_01_scaffold_12526_6
GWC1_OP11_37_12, Roizmanbacteria, Microgenomates, Bacteria

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comp(3014..3478)
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ24342.1}; TaxID=1618483 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC1_37_12.;"
YbaK/prolyl-tRNA synthetase associated region id=4531411 bin=GWF2_Methylomirabilis_70_14 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
rifcsplowo2_01_scaffold_12526_7
unknown

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comp(3481..3714)
DNA (234bp) protein (78aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12526_8
unknown

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3837..4442
DNA (606bp) protein (202aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12526_9
CG_Woesearch_02, Woesearchaeota, Archaea

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4535..5590
DNA (1056bp) protein (352aa)
hypothetical protein
Phosphoesterase, DHHA1 Tax=CG_Woesearch_02
DHH phosphoesterases id=5800602 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_12526_10
unknown

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5646..6035
DNA (390bp) protein (130aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12526_11
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

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6055..6699
DNA (645bp) protein (215aa)
sigma-54-interacting response regulator Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Helix-turn-helix, Fis-type id=5043985 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ntrX; Nitrogen assimilation regulatory protein ntrX
rifcsplowo2_01_scaffold_12526_12
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(6783..8834)
DNA (2052bp) protein (684aa)
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GJH9_METPE rbh
rifcsplowo2_01_scaffold_12526_13

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comp(8948..9334)
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51940.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
id=5047532 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_12526_14
unknown

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comp(9315..10235)
DNA (921bp) protein (307aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12526_15
unknown

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comp(10312..10509)
DNA (198bp) protein (66aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12526_16
unknown

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10657..11610
DNA (954bp) protein (318aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL Tax=AR20
SpoVT/AbrB protein
rifcsplowo2_01_scaffold_12526_17
unknown

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11740..12144
DNA (405bp) protein (135aa)

This feature has no annotations

Displaying 17 items

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