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rifcsplowo2_01_scaffold_3284

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_3284_1
R_OP11_Levybacteria_36_8b, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(345..1007)
DNA (663bp) protein (221aa)
Tax=RIFCSPLOWO2_02_FULL_OP11_Levybacteria_36_8b_curated
rifcsplowo2_01_scaffold_3284_2
Thermococcus gammatolerans, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

1106..1624
DNA (519bp) protein (173aa)
50S ribosomal protein L15e n=1 Tax=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) RepID=RL15E_THEGJ
rpl15E; 50S ribosomal protein L15e
50S ribosomal protein L15e {ECO:0000255|HAMAP-Rule:MF_00256}; TaxID=593117 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus gammatole
rifcsplowo2_01_scaffold_3284_3
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

1985..3235
DNA (1251bp) protein (417aa)
DEAD/DEAH box helicase; K05592 ATP-dependent RNA helicase DeaD [EC:3.6.4.13] Tax=CG_Woesearch_03
DEAD/DEAH box helicase domain protein n=1 Tax=Methanosalsum zhilinae (strain DSM 4017 / NBRC 107636 / OCM 62 / WeN5) RepID=F7XL25_METZD
DEAD/DEAH box helicase
rifcsplowo2_01_scaffold_3284_4
unknown

Not on your lists

comp(3290..3715)
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000360D11D
rifcsplowo2_01_scaffold_3284_5

Not on your lists

comp(3780..6284)
DNA (2505bp) protein (835aa)
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
DNA mismatch repair protein MutS id=4907887 bin=GWC2_Nitrospirae-rel_56_14 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
DNA mismatch repair protein MutS
rifcsplowo2_01_scaffold_3284_6
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

comp(6908..7528)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WPW1_METH6
Putative uncharacterized protein Tax=GWA1_Berkelbacteria_36_10
hypothetical protein
rifcsplowo2_01_scaffold_3284_7
RBG_13_Chloroflexi_52_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(7544..8689)
DNA (1146bp) protein (382aa)
Peptidase M50 n=1 Tax=Dehalogenimonas lykanthroporepellens (strain ATCC BAA-1523 / JCM 15061 / BL-DC-9) RepID=D8K0P3_DEHLB
peptidase M50 Tax=RBG_13_Chloroflexi_52_14_curated
peptidase M50
rifcsplowo2_01_scaffold_3284_8
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(8794..9564)
DNA (771bp) protein (257aa)
hypothetical protein n=1 Tax=unclassified candidate division KSB1 RepID=UPI0003796B8D
transcriptional regulator TrmB Tax=AR17
transcription regulator
rifcsplowo2_01_scaffold_3284_9
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

9775..10605
DNA (831bp) protein (277aa)
putative phosphatase; K01082 3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7] Tax=AR17
Putative phosphatase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I576_CALAS
putative phosphatase
rifcsplowo2_01_scaffold_3284_10
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(10629..11465)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VIV2_METM7
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_01_scaffold_3284_11
unknown

Not on your lists

11580..11876
DNA (297bp) protein (99aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3284_12
Streptomyces pratensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11879..12508
DNA (630bp) protein (210aa)
Isochorismatase hydrolase n=1 Tax=Streptomyces flavogriseus (strain ATCC 33331 / DSM 40990 / IAF-45CD) RepID=E8W6T3_STRFA
isochorismatase hydrolase
Isochorismatase hydrolase {ECO:0000313|EMBL:ADW05438.1}; TaxID=591167 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces pratensis (strain ATC
rifcsplowo2_01_scaffold_3284_13
unknown

Not on your lists

comp(12677..12970)
DNA (294bp) protein (98aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3284_14
Tolypothrix campylonemoides, Tolypothrix, Nostocales, Cyanobacteria, Bacteria

Not on your lists

comp(12983..14464)
DNA (1482bp) protein (494aa)
RNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1245935 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Tolypothrix.;" sourc
tRNA-splicing ligase RtcB n=1 Tax=Fischerella muscicola RepID=UPI000300B63A
protein of unknown function UPF0027
rifcsplowo2_01_scaffold_3284_15
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

14767..15531
DNA (765bp) protein (255aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TD65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMR74763.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
rifcsplowo2_01_scaffold_3284_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15644..16240
DNA (597bp) protein (199aa)
phosphatidate cytidylyltransferase Tax=CG_Woesearch_02
hypothetical protein id=5046627 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_3284_17
unknown

Not on your lists

comp(16196..17038)
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Arhodomonas aquaeolei RepID=UPI00035C1C28
rifcsplowo2_01_scaffold_3284_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

17079..17447
DNA (369bp) protein (123aa)
Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_3284_19
Candidatus Methanomethylophilus alvus, Candidatus Methanomethylophilus, Methanomassiliicoccales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

comp(17533..18696)
DNA (1164bp) protein (388aa)
Uncharacterized protein n=2 Tax=Euryarchaeota RepID=M9SK24_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGI85827.1}; TaxID=1236689 species="Archaea; Euryarchaeota; Thermoplasmata; Methanomassiliicoccales; Methanomassiliicoccaceae; Candidatus Methanomethylophilus
rifcsplowo2_01_scaffold_3284_20
unknown

Not on your lists

18800..19258
DNA (459bp) protein (153aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3284_21

Not on your lists

comp(19279..19731)
DNA (453bp) protein (151aa)
Transcription regulator, Lrp/AsnC family id=5050205 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription regulator, Lrp/AsnC family {ECO:0000313|EMBL:KHO44986.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
AsnC family transcriptional regulator
rifcsplowo2_01_scaffold_3284_22
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19903..20922
DNA (1020bp) protein (340aa)
Glutamine synthetase {ECO:0000256|RuleBase:RU004356}; EC=6.3.1.2 {ECO:0000256|RuleBase:RU004356};; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispo
Glutamine synthetase n=1 Tax=Actinoplanes missouriensis (strain ATCC 14538 / DSM 43046 / CBS 188.64 / JCM 3121 / NCIMB 12654 / NBRC 102363 / 431) RepID=I0H7E1_ACTM4
putative glutamine synthetase
rifcsplowo2_01_scaffold_3284_23
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

20915..21190
DNA (276bp) protein (92aa)
Transposase family protein n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C1T9_9CREN
transposase IS4 family protein
Tax=BJP_IG2158_Thermoplasmatales_53_16
rifcsplowo2_01_scaffold_3284_24
unknown

Not on your lists

21177..21356
DNA (180bp) protein (60aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3284_25
unknown

Not on your lists

comp(21412..22017)
DNA (606bp) protein (202aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3284_26
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(22017..22634)
DNA (618bp) protein (206aa)
phage SPO1 DNA polymerase-like protein; K02334 DNA polymerase bacteriophage-type [EC:2.7.7.7] Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
DNA polymerase n=2 Tax=Pyrococcus furiosus RepID=I6UQI2_9EURY
DNA polymerase
rifcsplowo2_01_scaffold_3284_27
unknown

Not on your lists

comp(22786..23070)
DNA (285bp) protein (95aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3284_28
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


23433..23915
DNA (483bp) protein (161aa)
transcription antitermination protein NusG Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L24A Rpl24A
rifcsplowo2_01_scaffold_3284_29
unknown

Not on your lists

23927..24328
DNA (402bp) protein (134aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3284_30
unknown

Not on your lists

comp(24751..25503)
DNA (753bp) protein (251aa)

This feature has no annotations

Displaying items 1-30 of 80 in total

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