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rifcsplowo2_01_scaffold_2905

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2905_1

Not on your lists

comp(3..2201)
DNA (2199bp) protein (733aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase id=1249701 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
Ribonucleoside-diphosphate reductase {ECO:0000313|EMBL:EQB62564.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
rifcsplowo2_01_scaffold_2905_2
RHI_OP11_45_10, Microgenomates, Bacteria

Not on your lists

comp(2228..2680)
DNA (453bp) protein (151aa)
nrdR; transcriptional regulator NrdR (EC:2.5.1.-)
Transcriptional repressor NrdR n=2 Tax=Clostridium tetani RepID=NRDR_CLOTE
nrdR; transcriptional regulator NrdR; K07738 transcriptional repressor NrdR Tax=RIFCSPHIGHO2_12_FULL_OP11_45_10_curated
rifcsplowo2_01_scaffold_2905_3

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3255..3575
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035FEC2B
Uncharacterized protein {ECO:0000313|EMBL:KHO46559.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_01_scaffold_2905_4
CG_Pacearch_03, Pacearchaeota, Archaea

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3680..3907
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003744ADF
Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_2905_5
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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3904..4263
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003705994
PIN domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
putative ribonuclease VapC
rifcsplowo2_01_scaffold_2905_6

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4445..5296
DNA (852bp) protein (284aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Large subunit ribosomal protein L11 {ECO:0000313|EMBL:KHO46636.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
LSU ribosomal protein L11P
rifcsplowo2_01_scaffold_2905_7
unknown

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5398..5718
DNA (321bp) protein (107aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2905_8

Not on your lists

5871..6131
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Croceibacter atlanticus (strain ATCC BAA-628 / HTCC2559 / KCTC 12090) RepID=A3U7S2_CROAH
Marine sediment metagenome DNA, contig: S01H1_S22745 {ECO:0000313|EMBL:GAG14196.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsplowo2_01_scaffold_2905_9
unknown

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6214..6522
DNA (309bp) protein (103aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2905_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6507..7331)
DNA (825bp) protein (275aa)
D-tyrosyl-tRNA(Tyr) deacylase id=4541657 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein; K09716 hypothetical protein Tax=CG_Woesearch_02
Uncharacterized protein conserved in archaea
rifcsplowo2_01_scaffold_2905_11
R_Elusimicrobia_59_12, Elusimicrobia, Bacteria

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comp(7328..8275)
DNA (948bp) protein (316aa)
A/G-specific adenine glycosylase; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=RIFCSPLOWO2_01_FULL_Elusimicrobia_59_12_curated
A/G-specific adenine glycosylase n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SEV4_RHOMR
A/G-specific adenine glycosylase
rifcsplowo2_01_scaffold_2905_12
CG_Woesearch_02, Woesearchaeota, Archaea

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8655..8876
DNA (222bp) protein (74aa)
id=4541659 bin=PER_GWC2_41_7 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=4541659 Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_2905_13

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8877..9182
DNA (306bp) protein (102aa)
id=5043594 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46570.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_2905_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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9209..9463
DNA (255bp) protein (85aa)
hypothetical protein
id=5800009 Tax=RBG_13_Woesearchaeota_36_6_curated
id=5800009 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_2905_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

9460..9846
DNA (387bp) protein (129aa)
hypothetical protein; K09738 hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
Putative uncharacterized protein id=5800008 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_2905_16
unknown

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9945..11684
DNA (1740bp) protein (580aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2905_17
unknown

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11787..12920
DNA (1134bp) protein (378aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2905_18
unknown

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12925..13764
DNA (840bp) protein (280aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2905_19
AR11, Woesearchaeaota, DPANN, Archaea

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comp(13761..14219)
DNA (459bp) protein (153aa)
hypothetical protein Tax=AR11
Putative uncharacterized protein id=5800004 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_2905_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14351..16111)
DNA (1761bp) protein (587aa)
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=CG_Woesearch_02
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B id=5043737 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
InfB_2; translation initiation factor IF-2
rifcsplowo2_01_scaffold_2905_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16218..16610)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AA1BA
Putative uncharacterized protein Tax=AR11
hypothetical protein
rifcsplowo2_01_scaffold_2905_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(16607..16894)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003622986
Predicted protein Tax=AR11
hypothetical protein
rifcsplowo2_01_scaffold_2905_23
unknown

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17057..17452
DNA (396bp) protein (132aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2905_24
GWC2_OD1_37_9_partial, Yanofskybacteria, Parcubacteria, Bacteria

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17570..19828
DNA (2259bp) protein (753aa)
putative hemolysin id=5045996 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
RTX family of calcium-binding protein {ECO:0000313|EMBL:KKQ47170.1}; Flags: Fragment;; TaxID=1619028 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWC2_
Peptidase S8 and S53, subtilisin, kexin, sedolisin
rifcsplowo2_01_scaffold_2905_25
unknown

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19921..20271
DNA (351bp) protein (117aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2905_26

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20315..21319
DNA (1005bp) protein (335aa)
tRNA (Guanine26-N2/guanine27-N2)-dimethyltransferase {ECO:0000313|EMBL:KHO51018.1}; EC=2.1.1.215 {ECO:0000313|EMBL:KHO51018.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
tRNA N2N2-dimethyl(Guanine2,6-N2)-methyltransferase; K00555 tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216] id=5043736 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
N(2),N(2)-dimethylguanosine tRNA methyltransferase (EC:2.1.1.32)
rifcsplowo2_01_scaffold_2905_27

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comp(21316..21615)
DNA (300bp) protein (100aa)
Elongation factor 1-beta n=2 Tax=Methanobacterium RepID=K2RST2_METFO id=5103134 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-beta
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=157937
rifcsplowo2_01_scaffold_2905_28

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comp(22257..23360)
DNA (1104bp) protein (368aa)
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4
RNA 3'-terminal-phosphate cyclase (EC:6.5.1.4)
RNA 3'-terminal phosphate cyclase id=5800817 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_2905_29
unknown

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comp(23542..23784)
DNA (243bp) protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2905_30
AR15, Woesearchaeaota, DPANN, Archaea

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comp(23777..25276)
DNA (1500bp) protein (500aa)
Putative uncharacterized protein id=5799954 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative uncharacterized protein Tax=AR15
hypothetical protein
Displaying items 1-30 of 62 in total

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