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rifcsplowo2_01_scaffold_4946

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_4946_1
AR4, Woesearchaeaota, DPANN, Archaea

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1..192
DNA (192bp) protein (64aa)
hypothetical protein
id=5048386 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsplowo2_01_scaffold_4946_2
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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296..556
DNA (261bp) protein (87aa)
Transcriptional regulator, AbrB family n=1 Tax=Turneriella parva (strain ATCC BAA-1111 / DSM 21527 / NCTC 11395 / H) RepID=I4B9W0_TURPD
hypothetical protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
transcriptional regulator, AbrB family
rifcsplowo2_01_scaffold_4946_3

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553..963
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037058C3
Uncharacterized protein {ECO:0000313|EMBL:KHO46002.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
putative toxin-antitoxin system toxin component, PIN family
rifcsplowo2_01_scaffold_4946_4
AR4, Woesearchaeaota, DPANN, Archaea

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comp(960..1745)
DNA (786bp) protein (262aa)
putative ABC transporter ATP-binding and permease; K01992 ABC-2 type transport system permease protein id=5041686 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative ABC transporter ATP-binding and permease; K01992 ABC-2 type transport system permease protein Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_4946_5
AR4, Woesearchaeaota, DPANN, Archaea

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comp(1742..2671)
DNA (930bp) protein (310aa)
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein id=5041685 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein Tax=AR4
daunorubicin resistance ATP-binding protein
rifcsplowo2_01_scaffold_4946_6
CG_Woesearch_02, Woesearchaeota, Archaea

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2837..3703
DNA (867bp) protein (289aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369D442
transposase IS4 family protein Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_4946_7
AR15, Woesearchaeaota, DPANN, Archaea

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3700..4038
DNA (339bp) protein (113aa)
Nascent polypeptide-associated complex protein id=5800198 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Nascent polypeptide-associated complex protein Tax=AR15
nac; nascent polypeptide-associated complex protein
rifcsplowo2_01_scaffold_4946_8
Thermoplasmatales archaeon SCGC AB-540-F20, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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4084..4302
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-540-F20 RepID=M7TZ66_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMR75071.1}; TaxID=1242866 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-540-F20.;"
hypothetical protein
rifcsplowo2_01_scaffold_4946_9

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4303..4557
DNA (255bp) protein (85aa)
Addiction module antitoxin n=1 Tax=mine drainage metagenome RepID=T0ZTB3_9ZZZZ
RelE protein {ECO:0000313|EMBL:KHO51702.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
RelE protein
rifcsplowo2_01_scaffold_4946_10
AR4, Woesearchaeaota, DPANN, Archaea

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4627..5121
DNA (495bp) protein (165aa)
hypothetical protein
id=5048388 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsplowo2_01_scaffold_4946_11
CG_Woesearch_01, Woesearchaeota, Archaea

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5087..5539
DNA (453bp) protein (151aa)
hypothetical protein
id=5800196 Tax=CG_Woesearch_01
id=5103666 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_4946_12
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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5536..6237
DNA (702bp) protein (234aa)
septum site-determining protein mind; K03609 septum site-determining protein MinD Tax=RBG_16_Micrarchaeota_36_9_curated
cell division ATPase MinD; K03609 septum site-determining protein MinD id=18248721 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
iron-sulfur cluster carrier protein
rifcsplowo2_01_scaffold_4946_13
AR4, Woesearchaeaota, DPANN, Archaea

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6234..6734
DNA (501bp) protein (167aa)
id=5048391 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsplowo2_01_scaffold_4946_14

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6770..7075
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50773.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
seg id=5800268 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_4946_15
Streptomyces sp. NRRL S-444, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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7215..9101
DNA (1887bp) protein (629aa)
hypothetical protein n=1 Tax=Streptomyces sp. ATexAB-D23 RepID=UPI000367F04D
Uncharacterized protein {ECO:0000313|EMBL:KJY40872.1}; TaxID=1609134 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-444.;"
lipase class 2
rifcsplowo2_01_scaffold_4946_16

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9484..10095
DNA (612bp) protein (204aa)
Marine sediment metagenome DNA, contig: S01H1_L06460 {ECO:0000313|EMBL:GAF76521.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S13P id=5799893 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S13
rifcsplowo2_01_scaffold_4946_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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10097..10735
DNA (639bp) protein (213aa)
30S ribosomal protein S4 n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZP85_THELI
30S ribosomal protein S4 Tax=RBG_13_Woesearchaeota_36_6_curated
30S ribosomal protein S4P
rifcsplowo2_01_scaffold_4946_18
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


10737..11135
DNA (399bp) protein (133aa)
rps11p; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=CG_Woesearch_01
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11P
rifcsplowo2_01_scaffold_4946_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

11137..11919
DNA (783bp) protein (261aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_13_Woesearchaeota_36_6_curated
DNA-directed RNA polymerase subunit D id=5799890 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase subunit D
rifcsplowo2_01_scaffold_4946_20
CG_Woesearch_02, Woesearchaeota, Archaea

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12160..12492
DNA (333bp) protein (111aa)
50S ribosomal protein L18e n=1 Tax=Thermosphaera aggregans (strain DSM 11486 / M11TL) RepID=D5U3F3_THEAM
50S ribosomal protein L15; K02883 large subunit ribosomal protein L18e Tax=CG_Woesearch_02
50S ribosomal protein L18
rifcsplowo2_01_scaffold_4946_21
CG_Woesearch_02, Woesearchaeota, Archaea

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12494..12907
DNA (414bp) protein (138aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000361BC64
50S ribosomal protein L13 Tax=CG_Woesearch_02
50S ribosomal protein L13
rifcsplowo2_01_scaffold_4946_22
CG_Woesearch_02, Woesearchaeota, Archaea

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12904..13308
DNA (405bp) protein (135aa)
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Woesearch_02
SSU ribosomal protein S9P id=5799887 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S9
rifcsplowo2_01_scaffold_4946_23

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13321..13518
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N n=1 Tax=uncultured organism HF70_19B12 RepID=Q2Q0G7_9ZZZZ id=5103677 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Marine sediment metagenome DNA, contig: S01H1_S00836 {ECO:0000313|EMBL:GAF92383.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA-directed RNA polymerase subunit N
rifcsplowo2_01_scaffold_4946_24
CG_Woesearch_02, Woesearchaeota, Archaea

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13574..16234
DNA (2661bp) protein (887aa)
leucyl-tRNA synthetase (EC:6.1.1.9); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=CG_Woesearch_02
leuS; leucyl-tRNA synthetase (EC:6.1.1.4); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] id=5048518 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Leucine-tRNA ligase
rifcsplowo2_01_scaffold_4946_25
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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16237..16983
DNA (747bp) protein (249aa)
Putative metal-dependent hydrolase related to alanyl-tRNA synthetase HxxxH domain {ECO:0000313|EMBL:ETA68913.1}; EC=3.1.1.- {ECO:0000313|EMBL:ETA68913.1};; TaxID=1090322 species="Archaea; Euryarchaeot
UPI0003D1B02C related cluster n=1 Tax=unknown RepID=UPI0003D1B02C
Ser-tRNA(Ala) deacylase
rifcsplowo2_01_scaffold_4946_26

Not on your lists

16985..17851
DNA (867bp) protein (289aa)
Conserved hypothetical membrane protein, auxin efflux carrier family n=1 Tax=uncultured archaeon RepID=D1JDW6_9ARCH
Conserved hypothetical membrane protein, auxin efflux carrier family {ECO:0000313|EMBL:CBH36724.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
transporter
rifcsplowo2_01_scaffold_4946_27
CG_Woesearch_02, Woesearchaeota, Archaea

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18284..19126
DNA (843bp) protein (281aa)
beta-lactamase superfamily hydrolase Tax=CG_Woesearch_02
Metal-dependent hydrolase, beta-lactamase superfamily III id=5799925 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
beta-lactamase superfamily hydrolase
rifcsplowo2_01_scaffold_4946_28

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comp(19113..20015)
DNA (903bp) protein (301aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50638.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Uncharacterized protein conserved in archaea id=5799929 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_4946_29
unknown

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20107..20268
DNA (162bp) protein (54aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4946_30
unknown

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20324..20503
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 30 items

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