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rifcsplowo2_01_scaffold_8231

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_8231_1
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2..175)
DNA (174bp) protein (58aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003770C1A
adenylate kinase Tax=CG_Woesearch_02
Adenylate kinase
rifcsplowo2_01_scaffold_8231_2
unknown

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comp(227..436)
DNA (210bp) protein (70aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8231_3
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(480..815)
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LIR6_THEBM id=5103832 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Pacearch_04
hypothetical protein
rifcsplowo2_01_scaffold_8231_4
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(812..1417)
DNA (606bp) protein (202aa)
hypothetical protein Tax=CG_Woesearch_01
ArsR family transcriptional regulator id=5050187 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
transcriptional regulator, TrmB
rifcsplowo2_01_scaffold_8231_5
CG_Woesearch_02, Woesearchaeota, Archaea

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1454..1972
DNA (519bp) protein (173aa)
helix-turn-helix domain-containing protein; K03627 putative transcription factor Tax=CG_Woesearch_02
transcription factor; K03627 putative transcription factor id=5041886 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_8231_6

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comp(1973..3334)
DNA (1362bp) protein (454aa)
dolichyl-phosphate-mannose-protein mannosyltransferase (EC:2.4.1.109)
id=5050185 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO44966.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_8231_7
CG_Woesearch_02, Woesearchaeota, Archaea

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3446..4687
DNA (1242bp) protein (414aa)
Glycosyltransferase involved in cell wall biogenesis n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PVI5_9BACT
putative bi-functional transferase/deacetylase Tax=CG_Woesearch_02
Glycosyltransferase involved in cell wall biogenesis
rifcsplowo2_01_scaffold_8231_8
unknown

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4678..5358
DNA (681bp) protein (227aa)
transmembrane_regions id=18248833 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
rifcsplowo2_01_scaffold_8231_9

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5755..6453
DNA (699bp) protein (233aa)
DNA repair and recombination protein RadB n=1 Tax=nanoarchaeote Nst1 RepID=R1G2W9_9ARCH
DNA repair and recombination protein RadB {ECO:0000256|HAMAP-Rule:MF_00350}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
radB; DNA repair and recombination protein RadB
rifcsplowo2_01_scaffold_8231_10
AR11, Woesearchaeaota, DPANN, Archaea

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6629..8161
DNA (1533bp) protein (511aa)
propionyl-CoA carboxylase carboxyltransferase subunit (EC:6.4.1.3) Tax=AR11
propionyl-CoA carboxylase carboxyltransferase subunit (EC:6.4.1.3)
Propionyl-CoA carboxylase carboxyltransferase subunit n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RZ08_THEOJ
rifcsplowo2_01_scaffold_8231_11

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8167..8547
DNA (381bp) protein (127aa)
Biotin carboxyl carrier protein n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8RAJ2_THETN
Biotin/lipoyl attachment protein {ECO:0000313|EMBL:KHO50319.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
AccB; biotin carboxyl carrier protein
rifcsplowo2_01_scaffold_8231_12
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8552..9091
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0J3_METHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB50465.1}; Flags: Precursor;; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovorans.;"
rifcsplowo2_01_scaffold_8231_13
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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9092..9877
DNA (786bp) protein (262aa)
DipZ protein n=1 Tax=Liberibacter crescens (strain BT-1) RepID=L0EW81_LIBCB
Uncharacterized protein {ECO:0000313|EMBL:CDI03312.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
DipZ protein
rifcsplowo2_01_scaffold_8231_14
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9881..10582
DNA (702bp) protein (234aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Energy-coupling factor transporter ATP-binding protein EcfA1 n=3 Tax=Clostridium acetobutylicum RepID=ECFA1_CLOAB
cobalt transporter ATP-binding subunit
rifcsplowo2_01_scaffold_8231_15
Desulfosporosinus youngiae, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10575..11291
DNA (717bp) protein (239aa)
ABC-type cobalt transport system, permease component CbiQ n=1 Tax=Desulfosporosinus youngiae DSM 17734 RepID=H5Y208_9FIRM
ABC-type cobalt transport system, permease component CbiQ {ECO:0000313|EMBL:EHQ88206.1}; TaxID=768710 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" sou
cobalt ABC transporter permease CbiQ
rifcsplowo2_01_scaffold_8231_16
unknown

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11375..11500
DNA (126bp) protein (42aa)

This feature has no annotations

rifcsplowo2_01_scaffold_8231_17
AR11, Woesearchaeaota, DPANN, Archaea

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comp(11501..11776)
DNA (276bp) protein (92aa)
Tax=AR11
rifcsplowo2_01_scaffold_8231_18
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(11810..12523)
DNA (714bp) protein (238aa)
Biotin/acetyl-CoA-carboxylase ligase n=1 Tax=Alicyclobacillus hesperidum URH17-3-68 RepID=J9H9V1_9BACL
biotin-protein ligase
Biotin-protein ligase {ECO:0000313|EMBL:AHF79760.1}; TaxID=582419 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus paralvinellae.;"
rifcsplowo2_01_scaffold_8231_19

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comp(12520..14412)
DNA (1893bp) protein (631aa)
Acetyl-CoA carboxylase, biotin carboxylase subunit {ECO:0000313|EMBL:KHO51243.1}; EC=6.4.1.2 {ECO:0000313|EMBL:KHO51243.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
acetyl-CoA carboxylase biotin carboxylase subunit n=1 Tax=Laceyella sacchari RepID=UPI0003B3ADEA
acetyl-CoA carboxylase, biotin carboxylase subunit
rifcsplowo2_01_scaffold_8231_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

14596..15090
DNA (495bp) protein (165aa)
fabZ; 3-hydroxyacyl-ACP dehydratase (EC:4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-] Tax=AR11
lpxC/fabZ; bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-ACP dehydratase (EC:3.5.1.- 4.2.1.-); K02372 3R-hydroxymyristoyl ACP dehydrase [EC:4.2.1.-]; K02535 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase [EC:3.5.1.108] id=16783863 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curat
fabZ; 3-hydroxyacyl-ACP dehydratase (EC:4.2.1.-)
rifcsplowo2_01_scaffold_8231_21

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15112..15384
DNA (273bp) protein (91aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:KHO50312.1}; EC=2.3.1.9 {ECO:0000313|EMBL:KHO50312.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00036F920A
Displaying 21 items

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