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rifcsplowo2_01_scaffold_2061

Search features with annotation key words

Displaying items 1-30 of 79 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2061_1
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3..3851)
DNA (3849bp) protein (1283aa)
cell surface protein id=5043703 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
cell surface protein Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_2061_2

Not on your lists

comp(3838..4077)
DNA (240bp) protein (80aa)
hypothetical protein
Marine sediment metagenome DNA, contig: S01H1_S14013 {ECO:0000313|EMBL:GAF99559.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
id=5046321 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_2061_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4247..5158)
DNA (912bp) protein (304aa)
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=AR18
tRNA pseudouridine synthase
rifcsplowo2_01_scaffold_2061_4
unknown

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comp(5163..6629)
DNA (1467bp) protein (489aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2061_5

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6746..7375
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CUK4_9ARCH id=5103149 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62430.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_2061_6
unknown

Not on your lists

7372..7683
DNA (312bp) protein (104aa)
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH id=5103148 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH Tax=AR20
LSU ribosomal protein L44E
rifcsplowo2_01_scaffold_2061_7
CG_Woesearch_02, Woesearchaeota, Archaea

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7680..7859
DNA (180bp) protein (60aa)
30S ribosomal protein S27e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEZ2_9EURY id=5103147 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps27e; 30S ribosomal protein S27e; K02978 small subunit ribosomal protein S27e Tax=CG_Woesearch_02
30S ribosomal protein S27e
rifcsplowo2_01_scaffold_2061_8

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7861..8640
DNA (780bp) protein (260aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFN2_ACIB4 id=5103146 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Translation initiation factor 2 subunit alpha
Translation initiation factor 2 subunit alpha {ECO:0000313|EMBL:AJF62427.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_2061_9

Not on your lists

8637..8801
DNA (165bp) protein (55aa)
H/ACA RNA-protein complex component Nop10p n=1 Tax=Nanoarchaeum equitans RepID=UPI000021D016
H/ACA RNA-protein complex component Nop10p
Ribosome biogenesis protein Nop10 {ECO:0000256|HAMAP-Rule:MF_00803}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_2061_10
unknown

Not on your lists

8758..9564
DNA (807bp) protein (269aa)
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO id=5103144 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO Tax=AR20
hypothetical protein
rifcsplowo2_01_scaffold_2061_11

Not on your lists

comp(9561..10793)
DNA (1233bp) protein (411aa)
PHP domain protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0A1_DICTD id=5103143 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
PHP protein
PHP protein {ECO:0000313|EMBL:AJF62424.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_2061_12
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10797..11720)
DNA (924bp) protein (308aa)
hypothetical protein
id=5103142 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_2061_13
unknown

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comp(11736..12779)
DNA (1044bp) protein (348aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2061_14
unknown

Not on your lists

comp(12751..14295)
DNA (1545bp) protein (515aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2061_15
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14309..15490)
DNA (1182bp) protein (394aa)
hypothetical protein
id=5103139 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_2061_16

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15544..16611
DNA (1068bp) protein (356aa)
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; TaxID=1579375 species="Archaea.;"
Protein pelota homolog id=5800182 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
mRNA surveillance protein Pelota
rifcsplowo2_01_scaffold_2061_17
unknown

Not on your lists

comp(16608..16916)
DNA (309bp) protein (103aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2061_18
unknown

Not on your lists

comp(16919..17164)
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2061_19
unknown

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17297..17695
DNA (399bp) protein (133aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2061_20
unknown

Not on your lists

comp(17692..18153)
DNA (462bp) protein (154aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2061_21
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(18150..19217)
DNA (1068bp) protein (356aa)
geranylgeranyl reductase Tax=CG_Pacearch_04
geranylgeranyl reductase id=5045950 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Geranylgeranyl reductase
rifcsplowo2_01_scaffold_2061_22

Not on your lists

19273..20157
DNA (885bp) protein (295aa)
Peptidase A24A prepilin type IV n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GUF4_9EURY id=5103136 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptidase A24A prepilin type IV
Peptidase A24A prepilin type IV {ECO:0000313|EMBL:AJF62417.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_2061_23

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comp(20154..20795)
DNA (642bp) protein (214aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_46FAA RepID=F3BC40_9FIRM id=5103135 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Hit-like protein involved in cell-cycle regulation {ECO:0000313|EMBL:KHO52407.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein
rifcsplowo2_01_scaffold_2061_24
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

20882..21955
DNA (1074bp) protein (358aa)
carA; Carbamoylphosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RBG_13_OP8X_37_8_curated
Carbamoyl-phosphate synthase small chain n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AN91_IGNAJ
carA; carbamoylphosphate synthase small subunit
rifcsplowo2_01_scaffold_2061_25
RBG_16_Aminicenantes_63_16_curated, Aminicenantes, Bacteria

Not on your lists

22021..25221
DNA (3201bp) protein (1067aa)
carbamoyl-phosphate synthase, large subunit Tax=RBG_16_Aminicenantes_63_16_curated
Carbamoylphosphate synthase large subunit id=3139166 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
carB; carbamoylphosphate synthase large subunit
rifcsplowo2_01_scaffold_2061_26
R_PER_ii_51_35, PER-ii, Bacteria

Not on your lists

25275..26174
DNA (900bp) protein (300aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_PER_ii_51_35_curated
3-demethylubiquinone-9 3-methyltransferase id=3469892 bin=GWF2_Ignavibacteria_35_20 species=Pirellula staleyi genus=Pirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria rbh
hypothetical protein
rifcsplowo2_01_scaffold_2061_27

Not on your lists

comp(26184..26588)
DNA (405bp) protein (135aa)
PilT protein domain protein n=1 Tax=mine drainage metagenome RepID=T1ASI2_9ZZZZ
PilT protein
PilT protein domain protein {ECO:0000313|EMBL:EQD43674.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
rifcsplowo2_01_scaffold_2061_28
unknown

Not on your lists

comp(26585..26821)
DNA (237bp) protein (79aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2061_29
unknown

Not on your lists

comp(26853..27128)
DNA (276bp) protein (92aa)
Elongation factor 1-beta n=2 Tax=Methanobacterium RepID=K2RST2_METFO id=5103134 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 1-beta n=2 Tax=Methanobacterium RepID=K2RST2_METFO Tax=AR20
Elongation factor 1-beta
rifcsplowo2_01_scaffold_2061_30
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(27130..27306)
DNA (177bp) protein (59aa)
hypothetical protein; K07580 hypothetical protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5799998 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Displaying items 1-30 of 79 in total

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