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rifcsplowo2_01_scaffold_3891

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_3891_1
CG_Pacearch_03, Pacearchaeota, Archaea

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1..348
DNA (348bp) protein (116aa)
id=2841826 Tax=CG_Pacearch_03
id=2841826 bin=GWF2_Planctomycete_41_51 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
rifcsplowo2_01_scaffold_3891_2
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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555..1154
DNA (600bp) protein (200aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000370FF52
hypothetical protein
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_3891_3
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

1151..1687
DNA (537bp) protein (179aa)
hypothetical protein
id=5051036 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_3891_4
GWC2_OD1_41_17, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

1932..3392
DNA (1461bp) protein (487aa)
Homospermidine synthase (EC:2.5.1.44)
Homospermidine synthase n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I754_METB6
Homospermidine synthase Tax=GWC2_OD1_41_17
rifcsplowo2_01_scaffold_3891_5
RLO_OD1_Falkowbacteria_45_13, Falkowbacteria, Parcubacteria, Bacteria

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3410..4600
DNA (1191bp) protein (397aa)
diaminopimelate decarboxylase Tax=RIFCSPLOWO2_12_FULL_OD1_Falkowbacteria_45_13_curated
Orn/DAP/Arg decarboxylase 2 id=3792500 bin=GWF2_Lentisphaerae_57_35 species=Opitutus terrae genus=Opitutus taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
Orn/DAP/Arg decarboxylase 2
rifcsplowo2_01_scaffold_3891_6
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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4688..5155
DNA (468bp) protein (156aa)
hypothetical protein Tax=RBG_16_Micrarchaeota_36_9_curated
Putative uncharacterized protein id=2898900 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsplowo2_01_scaffold_3891_7
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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5227..5601
DNA (375bp) protein (125aa)
heavy metal transport/detoxification protein Tax=RBG_16_Micrarchaeota_36_9_curated
rifcsplowo2_01_scaffold_3891_8
AR13, Pacearchaeaota, DPANN, Archaea

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5613..7046
DNA (1434bp) protein (478aa)
heavy metal transporter n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B4EB21
Heavy metal transport/detoxification protein (fragment) Tax=AR13
heavy metal transport/detoxification protein
rifcsplowo2_01_scaffold_3891_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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7049..9238
DNA (2190bp) protein (730aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RBG_13_Pacearchaeota_36_9_curated
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=5041922 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
copper-translocating P-type ATPase
rifcsplowo2_01_scaffold_3891_10
unknown

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9255..9413
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3891_11
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9500..10273
DNA (774bp) protein (258aa)
Beta-propeller domains of methanol dehydrogenase type n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RNM0_9CLOT
Beta-propeller domains of methanol dehydrogenase type {ECO:0000313|EMBL:CDF57629.1}; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="Th
beta-propeller domain-containing protein, methanol dehydrogenase
rifcsplowo2_01_scaffold_3891_12
Thermus sp. 2.9, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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10267..10449
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Thermus scotoductus (strain ATCC 700910 / SA-01) RepID=E8PJN4_THESS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHG65864.1}; TaxID=1577051 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus sp. 2.9.;"
rifcsplowo2_01_scaffold_3891_13
Prevotella sp. CAG:5226, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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10462..11046
DNA (585bp) protein (195aa)
LemA n=1 Tax=Prevotella sp. CAG:5226 RepID=R5ZVD1_9BACT
LemA {ECO:0000313|EMBL:CDA43413.1}; TaxID=1262930 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:5226.;"
LemA family protein
rifcsplowo2_01_scaffold_3891_14
unknown

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11113..11487
DNA (375bp) protein (125aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3891_15
CG_Pacearch_05, Pacearchaeota, Archaea

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11549..12250
DNA (702bp) protein (234aa)
Putative uncharacterized protein n=1 Tax=Methanohalophilus mahii (strain ATCC 35705 / DSM 5219 / SLP) RepID=D5E8U5_METMS id=5103711 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K09807 hypothetical protein Tax=CG_Pacearch_05
hypothetical protein
rifcsplowo2_01_scaffold_3891_16
Candidatus Nitrosopumilus sp. AR2, Nitrosopumilus, Nitrosopumilales, Thaumarchaeota, Archaea

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comp(12255..13346)
DNA (1092bp) protein (364aa)
Radical SAM family protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BFI6_9ARCH
radical SAM family protein
Radical SAM family protein {ECO:0000313|EMBL:AFS83785.1}; TaxID=1229909 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Nitrosopumilus.;" source="Candidatus Nitrosopumilus sp. A
rifcsplowo2_01_scaffold_3891_17
GWA1_OD1_44_21_partial, Yanofskybacteria, Parcubacteria, Bacteria

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comp(13343..14056)
DNA (714bp) protein (238aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KKT50733.1}; TaxID=1619021 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Yanofskybacteria) bacterium GW2011_GWA1_44_21.;"
dTDP-4-dehydrorhamnose reductase
dTDP-4-dehydrorhamnose reductase id=1956032 bin=GWE2_OD1_40_11 species=GWE2_OD1_40_11 genus=GWE2_OD1_40_11 taxon_order=GWE2_OD1_40_11 taxon_class=GWE2_OD1_40_11 phylum=OD1 tax=GWE2_OD1_40_11 organism_group=OD1 (Parcubacteria)
rifcsplowo2_01_scaffold_3891_18

Not on your lists


14223..14678
DNA (456bp) protein (152aa)
30S ribosomal protein S15 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036871FD
Marine sediment metagenome DNA, contig: S01H1_L03829 {ECO:0000313|EMBL:GAF76633.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S15/S13e
rifcsplowo2_01_scaffold_3891_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14704..16080
DNA (1377bp) protein (459aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003699C78
hypothetical protein; K07463 archaea-specific RecJ-like exonuclease Tax=CG_Woesearch_02
Phosphoesterase, RecJ-like protein
rifcsplowo2_01_scaffold_3891_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


16194..16769
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003738263
30S ribosomal protein S3Ae Tax=CG_Woesearch_02
30S ribosomal protein S3Ae
rifcsplowo2_01_scaffold_3891_21
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

16966..17910
DNA (945bp) protein (315aa)
galE; udp-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] Tax=GWE2_Bacteroidetes_29_8_curated
Udp-glucose 4-epimerase id=1828565 bin=GWE2_Bacteroidetes_29_8 species=unknown genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWE2_Bacteroidetes_29_8 organism_group=Bacteroidetes organism_desc=Good
dTDP-glucose 4,6-dehydratase
rifcsplowo2_01_scaffold_3891_22
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(17897..18865)
DNA (969bp) protein (323aa)
transmembrane_regions id=5091326 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
rifcsplowo2_01_scaffold_3891_23
Peregrinibacteria bacterium GW2011_GWA2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(18876..20330)
DNA (1455bp) protein (485aa)
algI; alginate O-acetylation protein id=5091325 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Putative poly(Beta-D-mannuronate) O-acetylase {ECO:0000313|EMBL:KKP37427.1}; TaxID=1619054 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_33_10.;"
algI; alginate O-acetylation protein
rifcsplowo2_01_scaffold_3891_24
Microgenomates bacterium GW2011_GWB1_44_8, Microgenomates, Bacteria

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comp(20362..21804)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-N07 RepID=UPI0003642515
Uncharacterized protein {ECO:0000313|EMBL:KKT77786.1}; TaxID=1618505 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWB1_44_8.;"
radical SAM protein
rifcsplowo2_01_scaffold_3891_25
RBG_16_OP11_Levybacteria_35_11_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(21848..22777)
DNA (930bp) protein (310aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037B5F12
hypothetical protein; K07027 Tax=RBG_16_OP11_Levybacteria_35_11_curated
Displaying 25 items

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