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rifcsplowo2_01_scaffold_24121

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_24121_1
AR20, Woesearchaeaota, DPANN, Archaea

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383..685
DNA (303bp) protein (101aa)
hypothetical protein
id=5103552 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_01_scaffold_24121_2

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comp(721..894)
DNA (174bp) protein (58aa)
30S ribosomal protein S27ae n=1 Tax=sediment metagenome RepID=D9PM36_9ZZZZ
30S ribosomal protein S27ae {ECO:0000313|EMBL:EFK95392.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
30S ribosomal protein S27
rifcsplowo2_01_scaffold_24121_3
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(894..1196)
DNA (303bp) protein (101aa)
30S ribosomal protein S24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
30S ribosomal protein S24; K02974 small subunit ribosomal protein S24e
rifcsplowo2_01_scaffold_24121_4
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1196..1381)
DNA (186bp) protein (62aa)
Transcription elongation factor Spt4 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-5
DNA-directed RNA polymerase, subunit E
rifcsplowo2_01_scaffold_24121_5
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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comp(1378..1974)
DNA (597bp) protein (199aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-
DNA-directed RNA polymerase subunit E
rifcsplowo2_01_scaffold_24121_6
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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3089..5485
DNA (2397bp) protein (799aa)
DNA gyrase subunit B (EC:5.99.1.3) Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
DNA gyrase subunit B (EC:5.99.1.3)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036286E1
rifcsplowo2_01_scaffold_24121_7
AR4, Woesearchaeaota, DPANN, Archaea

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comp(5482..5859)
DNA (378bp) protein (126aa)
VapC-type toxin; K07062 id=5045342 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
VapC-type toxin; K07062 Tax=AR4
VapC toxin protein
rifcsplowo2_01_scaffold_24121_8
unknown

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comp(5838..6062)
DNA (225bp) protein (75aa)

This feature has no annotations

rifcsplowo2_01_scaffold_24121_9
AR15, Woesearchaeaota, DPANN, Archaea

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6367..7155
DNA (789bp) protein (263aa)
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal protein S3AE Tax=AR15
rps3ae; 30S ribosomal protein S3AE
rifcsplowo2_01_scaffold_24121_10

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7260..7502
DNA (243bp) protein (81aa)
id=5044611 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46345.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_24121_11
RLO_Sulfuricurvum_43_24, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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7819..8139
DNA (321bp) protein (107aa)
DNA-damage-inducible protein D n=1 Tax=Methanoplanus limicola DSM 2279 RepID=H1YYM2_9EURY
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Sulfuricurvum_43_24_curated
dinD; DNA-damage-inducible protein D
Displaying 11 items

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