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rifcsplowo2_01_scaffold_41341

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_41341_1

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2..313
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52059.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Putative uncharacterized protein id=5045885 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_41341_2
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

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608..1906
DNA (1299bp) protein (433aa)
putative transcriptional regulator; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
hypothetical protein n=1 Tax=Omnitrophica bacterium SCGC AAA252-B19 RepID=UPI0003726D53
transcriptional regulator
rifcsplowo2_01_scaffold_41341_3
RifOxyA12_full_Proteobacteria_58_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1999..3000
DNA (1002bp) protein (334aa)
Tax=RifOxyA12_full_Proteobacteria_58_15_curated
rifcsplowo2_01_scaffold_41341_4

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3382..3927
DNA (546bp) protein (182aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=5044051 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Marine sediment metagenome DNA, contig: S01H1_S21827 {ECO:0000313|EMBL:GAG16811.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Ribonuclease
rifcsplowo2_01_scaffold_41341_5
CG_Woesearch_01, Woesearchaeota, Archaea

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4258..4638
DNA (381bp) protein (127aa)
hypothetical protein Tax=CG_Woesearch_01
id=5046836 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_01_scaffold_41341_6
AR18, Woesearchaeaota, DPANN, Archaea

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comp(4640..5008)
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000361813A
hypothetical protein
Tax=AR18
rifcsplowo2_01_scaffold_41341_7
unknown

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comp(5438..5839)
DNA (402bp) protein (134aa)

This feature has no annotations

rifcsplowo2_01_scaffold_41341_8

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5960..7915
DNA (1956bp) protein (652aa)
Minimal nucleotidyltransferase fused to HEPN domain id=5800529 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Minimal nucleotidyltransferase fused to HEPN protein {ECO:0000313|EMBL:AJF61860.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Minimal nucleotidyltransferase fused to HEPN protein
rifcsplowo2_01_scaffold_41341_9
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(7952..9196)
DNA (1245bp) protein (415aa)
Putative membrane protein n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6T1U8_9EURY
MgtC family protein
MgtC family protein {ECO:0000313|EMBL:AIS30865.1}; Uncharacterized protein {ECO:0000313|EMBL:CEA13685.1}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacter
rifcsplowo2_01_scaffold_41341_10
CG_Woesearch_02, Woesearchaeota, Archaea

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9332..9784
DNA (453bp) protein (151aa)
id=5044628 Tax=CG_Woesearch_02
id=5044628 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_41341_11
unknown

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10016..10342
DNA (327bp) protein (109aa)

This feature has no annotations

rifcsplowo2_01_scaffold_41341_12
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

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10365..10886
DNA (522bp) protein (174aa)
eno; enolase (EC:4.2.1.11) id=14426201 bin=bin1_lowGC species=Geobacillus sp. JF8 genus=Geobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin1_lowGC organism_group=Unknown_CP
eno; enolase (EC:4.2.1.11) Tax=CSP1_2_Dadabacteria
enolase
Displaying 12 items

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