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rifcsplowo2_01_scaffold_26845

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_26845_1

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comp(420..809)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FT78_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KHO49375.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
rifcsplowo2_01_scaffold_26845_2

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comp(820..1242)
DNA (423bp) protein (141aa)
hypothetical protein
hypothetical protein id=5048098 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45143.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_26845_3

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comp(1211..2896)
DNA (1686bp) protein (562aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52160.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein id=5048511 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_26845_4
AR18, Woesearchaeaota, DPANN, Archaea

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comp(2896..6690)
DNA (3795bp) protein (1265aa)
hypothetical protein id=5049573 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsplowo2_01_scaffold_26845_5

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6758..7141
DNA (384bp) protein (128aa)
coiled-coil id=5043755 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47071.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_26845_6
CG_Woesearch_03, Woesearchaeota, Archaea

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7193..7771
DNA (579bp) protein (193aa)
hypothetical protein
hypothetical protein Tax=CG_Woesearch_03
Putative uncharacterized protein id=5799950 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_26845_7

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comp(7781..8338)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C85AB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO50646.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rifcsplowo2_01_scaffold_26845_8

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comp(8338..8907)
DNA (570bp) protein (190aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO51136.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
seg id=5043751 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_26845_9

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comp(8917..9438)
DNA (522bp) protein (174aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO50644.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
transmembrane_regions id=5042248 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_26845_10
unknown

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comp(9701..10039)
DNA (339bp) protein (113aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26845_11
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(10079..10852)
DNA (774bp) protein (258aa)
putative ABC transporter ATP-binding and permease; K01992 ABC-2 type transport system permease protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Putative ABC-2 type transport system, ATP-binding and permease component id=4320766 bin=GWC2_OP3-like_45_7 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
ABC transporter
rifcsplowo2_01_scaffold_26845_12

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comp(10849..11775)
DNA (927bp) protein (309aa)
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein id=5041685 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Antibiotic transport system ATP-binding protein {ECO:0000313|EMBL:KHO47937.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
daunorubicin resistance ATP-binding protein
rifcsplowo2_01_scaffold_26845_13
unknown

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11901..12428
DNA (528bp) protein (176aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26845_14
CG_Woesearch_02, Woesearchaeota, Archaea

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12508..13089
DNA (582bp) protein (194aa)
translin, putative Tax=CG_Woesearch_02
hypothetical protein id=5042249 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
haloacid dehalogenase
rifcsplowo2_01_scaffold_26845_15
unknown

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13092..13322
DNA (231bp) protein (77aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26845_16
RBG_16_Deltaproteobacteria_50_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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13316..13885
DNA (570bp) protein (190aa)
metal dependent phosphohydrolase; K07023 putative hydrolases of HD superfamily Tax=RBG_16_Deltaproteobacteria_50_11_curated
Metal dependent phosphohydrolase id=4400369 bin=GWF2_OP3_38_59 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
metal dependent phosphohydrolase
rifcsplowo2_01_scaffold_26845_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(14053..14244)
DNA (192bp) protein (64aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_26845_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(14241..14453)
DNA (213bp) protein (71aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_01_scaffold_26845_19
CG_Woesearch_02, Woesearchaeota, Archaea

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14594..15949
DNA (1356bp) protein (452aa)
glutamyl-tRNA(gln) amidotransferase subunit A; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] Tax=CG_Woesearch_02
aspartyl/glutamyl-tRNA(asn/gln) amidotransferase subunit a (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXX4_METFV
rifcsplowo2_01_scaffold_26845_20
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16101..17159
DNA (1059bp) protein (353aa)
succinyl-CoA synthetase (ADP-forming) beta subunit (EC:6.2.1.5)
Succinate--CoA ligase (ADP-forming) {ECO:0000256|SAAS:SAAS00035312}; EC=6.2.1.5 {ECO:0000256|SAAS:SAAS00035312};; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae;
Succinyl-CoA synthetase (ADP-forming) beta subunit n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D1S9_DESAJ
rifcsplowo2_01_scaffold_26845_21
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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17147..18013
DNA (867bp) protein (289aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobal
Succinyl-CoA ligase [ADP-forming] subunit alpha 2 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=SUCD2_ARCFU
sucD-2; succinyl-CoA synthetase subunit alpha
rifcsplowo2_01_scaffold_26845_22
unknown

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18059..19135
DNA (1077bp) protein (359aa)

This feature has no annotations

rifcsplowo2_01_scaffold_26845_23

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comp(19136..20077)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003773F90
Marine sediment metagenome DNA, contig: S06H3_S00013 {ECO:0000313|EMBL:GAI32157.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
rifcsplowo2_01_scaffold_26845_24
AR17, Woesearchaeaota, DPANN, Archaea

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20291..20833
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037902D9
Tax=AR17
rifcsplowo2_01_scaffold_26845_25
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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20826..21299
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035DE931
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsplowo2_01_scaffold_26845_26
AR10, Diapherotrites, DPANN, Archaea

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21335..22333
DNA (999bp) protein (333aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.4); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=5241313 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.4); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=AR10
rifcsplowo2_01_scaffold_26845_27
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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22330..23304
DNA (975bp) protein (325aa)
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_16_Deltaproteobacteria_49_23_curated
pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
Pyruvate dehydrogenase E1 component subunit beta n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5S918_9BACT
rifcsplowo2_01_scaffold_26845_28

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comp(23299..23844)
DNA (546bp) protein (182aa)
magnesium and cobalt transporter CorA; K03284 magnesium transporter id=5044651 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Magnesium transport protein CorA {ECO:0000256|RuleBase:RU362010}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
magnesium and cobalt transport protein CorA
Displaying 28 items

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