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rifcsplowo2_01_scaffold_4706_4

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_41_36

near complete RP 34 / 55 MC: 5 BSCG 6 / 51 ASCG 33 / 38 MC: 3
Location: comp(2972..3958)

Top 3 Functional Annotations

Value Algorithm Source
H/ACA RNA-protein complex component Cbf5p (EC:5.4.99.12); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] id=5046920 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 54.8
  • Coverage: 301.0
  • Bit_score: 328
  • Evalue 8.70e-87
Putative tRNA pseudouridine synthase B {ECO:0000313|EMBL:KKU47144.1}; Flags: Fragment;; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 302.0
  • Bit_score: 334
  • Evalue 1.30e-88
putative tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 316.0
  • Bit_score: 324
  • Evalue 2.70e-86

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Taxonomy

Parcubacteria bacterium GW2011_GWA2_46_9 → Parcubacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGAACGAATACACCAAGAAACAGGCGCTCACAGACTCTCGCTTTGGTAAACACCCCTCTGAACGTACTGTCGCAGAATTAATCGAATTCGGTTGTATCAGTATCGATAAGCCTCCCGGTCCAACGTCTCATCAGGTCAGCGATTATGTGCAAAAGATTTTAGGTATTGAATCCGCGGGTCATGGCGGCAGTTTGGACCCGCAAGTCACTGGTGTATTGCCCGTCACTTTAGACAGAGCAACGCGTTTGTCGCAAGTCATGCTGAAAAGTGGCAAAGAGTACATCGGCGTGATGCATCTTCATCATGATGTTGATGGGCAGAAATTGCGTGCTGTCATCCAAAAGCATTTTATCGGCACAATCACACAAATGCCTCCCGTTCGCAGTGCAGTCAAACGAGCCTTGCGCGAACGTAATGTATACCGGTTTGACATTCTTGAGATTGAAGAAAAAGATGTCTTGTTTCATGTAGAATGTCAGGCAGGAACCTACATTCGAAAGTTGTGTTCTGACCTTGGACAAAAATTAAATGTTGGTGCGCATATGCTGTCGTTGCGACGCGTTCGTGCTGCACACTTTAGGGAATATGATTCCGTTACCTTACAAGACGTTCAGGATGCGATGACATTGTTGAAGCAGGGCAATGAAAAGTTTATTCGTCATTGTATTCATCCGGCGGAAAAAATGATTGAGTTTTTGCCAAAAGTCTGGGTGTTCGATTCTGCAGTTGAAAGTATCTGTCATGGCCGAGATGTTGCTGTGCCTGGCATTTCAAAATTCTCCGACATAAAATTAAACGATGATGTTGCGGTCATGACACTGAAAGATGAGCTTGTTGCCTTAGGTATTGCGCAGATGGATGACAAGTCAATCATGAAATCTGAAAAAGGCATTGCTGTCCGTGTGCATAAAGTGTTTATGAAAGCGGGGACGTATGGCGGCGCGACTTTTATGAAAGCGGGGACGTATGGCGGCGCGACTGGCTGA
PROTEIN sequence
Length: 329
MNEYTKKQALTDSRFGKHPSERTVAELIEFGCISIDKPPGPTSHQVSDYVQKILGIESAGHGGSLDPQVTGVLPVTLDRATRLSQVMLKSGKEYIGVMHLHHDVDGQKLRAVIQKHFIGTITQMPPVRSAVKRALRERNVYRFDILEIEEKDVLFHVECQAGTYIRKLCSDLGQKLNVGAHMLSLRRVRAAHFREYDSVTLQDVQDAMTLLKQGNEKFIRHCIHPAEKMIEFLPKVWVFDSAVESICHGRDVAVPGISKFSDIKLNDDVAVMTLKDELVALGIAQMDDKSIMKSEKGIAVRVHKVFMKAGTYGGATFMKAGTYGGATG*