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rifcsplowo2_01_scaffold_4706

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_4706_1
R_OD1_57_28, Parcubacteria, Bacteria

Not on your lists

186..1568
DNA (1383bp) protein (461aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] Tax=RIFCSPHIGHO2_01_FULL_OD1_57_28_curated
Orotidine-5'-phosphate decarboxylase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5R3_9ARCH
orotidine-5'-phosphate decarboxylase
rifcsplowo2_01_scaffold_4706_2

Not on your lists

1565..2491
DNA (927bp) protein (309aa)
Dihydroorotate dehydrogenase n=1 Tax=Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12) RepID=D4ZB29_SHEVD
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule
pyrD-2; dihydroorotate dehydrogenase
rifcsplowo2_01_scaffold_4706_3
unknown

Not on your lists

2494..2934
DNA (441bp) protein (147aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4706_4
Parcubacteria bacterium GW2011_GWA2_46_9, Parcubacteria, Bacteria

Not on your lists

comp(2972..3958)
DNA (987bp) protein (329aa)
H/ACA RNA-protein complex component Cbf5p (EC:5.4.99.12); K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] id=5046920 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Putative tRNA pseudouridine synthase B {ECO:0000313|EMBL:KKU47144.1}; Flags: Fragment;; TaxID=1618838 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_46_9.;"
putative tRNA pseudouridine synthase B
rifcsplowo2_01_scaffold_4706_5
unknown

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comp(3996..4457)
DNA (462bp) protein (154aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4706_6

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comp(4465..4878)
DNA (414bp) protein (138aa)
30S ribosomal protein S6e n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HBL9_METFS
30S ribosomal protein S6e {ECO:0000256|HAMAP-Rule:MF_00512, ECO:0000256|SAAS:SAAS00018829}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
ribosomal protein S6E (S10)
rifcsplowo2_01_scaffold_4706_7
unknown

Not on your lists

4999..5448
DNA (450bp) protein (150aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4706_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

5704..7077
DNA (1374bp) protein (458aa)
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5043950 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_4706_9
unknown

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7138..7791
DNA (654bp) protein (218aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4706_10
unknown

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7837..8340
DNA (504bp) protein (168aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4706_11

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8679..10787
DNA (2109bp) protein (703aa)
AP endonuclease family enzyme
Xylose isomerase-like, TIM barrel domain id=5043952 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46942.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_4706_12
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

10937..11824
DNA (888bp) protein (296aa)
Putative phosphoesterase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2M6_CALAS
putative phosphoesterase
Putative phosphoesterase {ECO:0000313|EMBL:BAL99513.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM
rifcsplowo2_01_scaffold_4706_13
GWF2_OD1_38_8, Parcubacteria, Bacteria

Not on your lists

11821..12357
DNA (537bp) protein (179aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LHT2_SYNFM
Putative uncharacterized protein Tax=GWF2_OD1_38_8
hypothetical protein
rifcsplowo2_01_scaffold_4706_14
GWA2_OD1_49_19_partial, Kaiserbacteria, Parcubacteria, Bacteria

Not on your lists

12370..13227
DNA (858bp) protein (286aa)
Uncharacterized protein n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FIE5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKW09085.1}; TaxID=1618669 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Kaiserbacteria) bacterium GW2011_GWA2_49_19.;"
EamA-like transporter family
rifcsplowo2_01_scaffold_4706_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13216..13794)
DNA (579bp) protein (193aa)
hypothetical protein Tax=AR11
rifcsplowo2_01_scaffold_4706_16
unknown

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comp(13997..14320)
DNA (324bp) protein (108aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4706_17

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comp(14310..15065)
DNA (756bp) protein (252aa)
seg id=5043957 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46947.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_4706_18
RLO_OD1_Giovannonibacteria_43_11c, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

comp(15228..15923)
DNA (696bp) protein (232aa)
sigma-54-interacting response regulator Tax=RIFCSPLOWO2_12_FULL_OD1_Giovannonibacteria_43_11c_curated
Helix-turn-helix, Fis-type id=5043985 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
two-component response regulator nitrogen regulation protein; K13599 two-component system, NtrC family, nitrogen regulation response regulator NtrX
rifcsplowo2_01_scaffold_4706_19

Not on your lists

15955..16458
DNA (504bp) protein (168aa)
hypothetical protein
id=5103621 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62902.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_01_scaffold_4706_20
unknown

Not on your lists

comp(16475..17068)
DNA (594bp) protein (198aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4706_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

17166..17972
DNA (807bp) protein (269aa)
DNA polymerase beta domain protein region Tax=CG_Woesearch_02
DNA polymerase beta domain protein region (Fragment) id=5800819 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA polymerase beta protein
rifcsplowo2_01_scaffold_4706_22
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

18143..18694
DNA (552bp) protein (184aa)
tRNA methylase id=5046019 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
tRNA methylase Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_4706_23
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(18707..20467)
DNA (1761bp) protein (587aa)
Uncharacterized protein n=1 Tax=Polysphondylium pallidum RepID=D3B0C9_POLPA
caaA2; trimeric autotransporter adhesin Tax=CG_Woesearch_03
hypothetical protein
rifcsplowo2_01_scaffold_4706_24
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(20552..21052)
DNA (501bp) protein (167aa)
type 11 methyltransferase Tax=CG_Woesearch_01
Demethylmenaquinone methyltransferase id=5799543 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
methyltransferase type 11
rifcsplowo2_01_scaffold_4706_25
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21334..22179)
DNA (846bp) protein (282aa)
hypothetical protein id=5045694 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsplowo2_01_scaffold_4706_26
R_OP11_Roizmanbacteria_41_22, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(22407..22994)
DNA (588bp) protein (196aa)
seg 15..27 Tax=RIFCSPLOWO2_01_FULL_OP11_Roizmanbacteria_41_22_curated
Uncharacterized protein (Fragment) id=5800258 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_4706_27
unknown

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23147..23530
DNA (384bp) protein (128aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4706_28
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(23694..25022)
DNA (1329bp) protein (443aa)
hypothetical protein; K03655 ATP-dependent DNA helicase RecG [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
Uncharacterized protein n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HMT9_PYRSN
putative transcriptional regulator
rifcsplowo2_01_scaffold_4706_29
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(25136..25531)
DNA (396bp) protein (132aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048321 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_4706_30
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

25658..26191
DNA (534bp) protein (178aa)
Protein GrpE n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JG66_9FIRM
GrpE protein; K03687 molecular chaperone GrpE Tax=CG_Woesearch_01
grpE; hypothetical protein
Displaying items 1-30 of 64 in total

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