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rifcsplowo2_01_scaffold_20467_10

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_41_36

near complete RP 34 / 55 MC: 5 BSCG 6 / 51 ASCG 33 / 38 MC: 3
Location: 4451..5005

Top 3 Functional Annotations

Value Algorithm Source
NMD3-related protein; K07562 nonsense-mediated mRNA decay protein 3 Tax=CG_Woesearch_02 similarity UNIPROT
DB: UniProtKB
  • Identity: 37.2
  • Coverage: 137.0
  • Bit_score: 102
  • Evalue 6.10e-19
Predicted nonsense mediated mRNA decay protein id=5800424 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 128.0
  • Bit_score: 101
  • Evalue 9.80e-19
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.7
  • Coverage: 121.0
  • Bit_score: 79
  • Evalue 8.60e-13

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Taxonomy

CG_Woesearch_02 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 555
ATGGATTTTTGCGTCAAGTGCGGGAAAAAAGAATTGTATGAAGACTTCTTATGCGAGAAGTGTTACACCGCAGAGCATCCACAGCGAGCAAAGAAAGTAAAGCCAAGAAAAAAGCCTGAAGCGCAGCATAGCGGTTATTTCGAAGCAACGTTGCAGATTCGTGTCATCGACCAGCACATTGTTGATTTCGTATACAAAGACCTTGAAAAACAGAAAATTATTGCCACCAAAGAAAAATGGCTTCCCAACGGCGTCGATCTATCAGTGAACAGCAGAAAGTATGCGCAGCAGCTTGGCAAAGCACTGCAACAAAAATTTGGAGGCATCCTTAAAGTCACGGCAAGAATTTTCACGCGTGACCGGCAGAGCAGCAAGGATGTGTACCGTATCACTGTCTTATTCAAGCAGTTTCCATTCAAGAAAGGAGATACATTTACCTACAAAGGTACAACATATGTTGTGAAAAATGCATCGCGTGAAGTTATTGGTGAGGATGCAACGAATAAAGAAAAAATATTTCGCTACAATGAGCTCGAACGCGCGCACGTTTTTTGA
PROTEIN sequence
Length: 185
MDFCVKCGKKELYEDFLCEKCYTAEHPQRAKKVKPRKKPEAQHSGYFEATLQIRVIDQHIVDFVYKDLEKQKIIATKEKWLPNGVDLSVNSRKYAQQLGKALQQKFGGILKVTARIFTRDRQSSKDVYRITVLFKQFPFKKGDTFTYKGTTYVVKNASREVIGEDATNKEKIFRYNELERAHVF*