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rifcsplowo2_01_scaffold_20467

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_20467_1
AR6, Pacearchaeaota, DPANN, Archaea

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1..495
DNA (495bp) protein (165aa)
CMP/dCMP deaminase; K01493 dCMP deaminase [EC:3.5.4.12] Tax=AR6
hypothetical protein
MG07298.4; hypothetical protein id=5241316 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_20467_2
GWB1_OD1_45_9, Parcubacteria, Bacteria

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821..1258
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI000363FB2C
Ribose-5-phosphate isomerase B Tax=GWB1_OD1_45_9
ribose-5-phosphate isomerase B
rifcsplowo2_01_scaffold_20467_3
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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1245..1883
DNA (639bp) protein (213aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1); K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=5093974 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Ribulose-phosphate 3-epimerase, ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:KKP40537.1}; EC=5.1.3.1 {ECO:0000313|EMBL:KKP40537.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="P
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
rifcsplowo2_01_scaffold_20467_4
unknown

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1880..2173
DNA (294bp) protein (98aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20467_5
RBG_13_Deltaproteobacteria_60_28_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2198..2434)
DNA (237bp) protein (79aa)
hypothetical protein; K09131 hypothetical protein Tax=RBG_13_Deltaproteobacteria_60_28_curated
Protein of unknown function DUF167 id=5043723 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_20467_6
unknown

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comp(2431..2910)
DNA (480bp) protein (160aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20467_7

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comp(2907..3152)
DNA (246bp) protein (82aa)
Marine sediment metagenome DNA, contig: S12H4_L00950 {ECO:0000313|EMBL:GAI82646.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
DNA-directed RNA polymerase subunit id=5799719 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
transcription termination factor Tfs
rifcsplowo2_01_scaffold_20467_8

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comp(3214..3852)
DNA (639bp) protein (213aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO51034.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
id=5103328 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_20467_9
unknown

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3905..4237
DNA (333bp) protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20467_10
CG_Woesearch_02, Woesearchaeota, Archaea

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4451..5005
DNA (555bp) protein (185aa)
NMD3-related protein; K07562 nonsense-mediated mRNA decay protein 3 Tax=CG_Woesearch_02
Predicted nonsense mediated mRNA decay protein id=5800424 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_20467_11
CG_Woesearch_01, Woesearchaeota, Archaea

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5002..7032
DNA (2031bp) protein (677aa)
ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=CG_Woesearch_01
pcrA; ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase n=1 Tax=Mycoplasma fermentans (strain JER) RepID=E1PSP7_MYCFJ
rifcsplowo2_01_scaffold_20467_12
unknown

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7226..7537
DNA (312bp) protein (104aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20467_13
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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7531..7824
DNA (294bp) protein (98aa)
ribonuclease p protein subunit rpp21 (EC:3.1.26.5)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036384A3
rifcsplowo2_01_scaffold_20467_14

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comp(7832..8293)
DNA (462bp) protein (154aa)
id=5045783 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46396.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_20467_15

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comp(8290..8841)
DNA (552bp) protein (184aa)
id=5045784 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46397.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_20467_16
unknown

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8951..9130
DNA (180bp) protein (60aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20467_17
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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9121..9402
DNA (282bp) protein (94aa)
universal diphthamide biosynthesis domain-containing protein; K07561 diphthamide synthase subunit DPH2 Tax=GWA2_WOR_2_47_8_curated
diphthamide biosynthesis protein; K07561 diphthamide synthase subunit DPH2 id=5045815 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
diphthamide biosynthesis protein
rifcsplowo2_01_scaffold_20467_18
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9708..10130)
DNA (423bp) protein (141aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_20467_19
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(10131..10466)
DNA (336bp) protein (112aa)
Protein belonging to Uncharacterized protein family UPF0175 n=1 Tax=uncultured organism RepID=M1P1S6_9ZZZZ
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_20467_20
R_OP11_Woesebacteria_44_24b, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(10850..11797)
DNA (948bp) protein (316aa)
Type IV secretory pathway VirB4 components-like protein n=3 Tax=candidate division TM7 genomosp. GTL1 RepID=A5KS14_9BACT id=5086825 bin=GWF1_OP11_31_35_complete species=candidate division TM7 genomosp. GTL1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
Type IV secretory pathway VirB4 components-like protein Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_44_24b_curated
hypothetical protein
rifcsplowo2_01_scaffold_20467_21

Not on your lists

comp(11806..13404)
DNA (1599bp) protein (533aa)
hypothetical protein, partial n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362CF74
Type IV secretory pathway VirB4 protein-like protein {ECO:0000313|EMBL:AIF11242.1}; TaxID=1456454 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III eurya
hypothetical protein
rifcsplowo2_01_scaffold_20467_22
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(13397..13711)
DNA (315bp) protein (105aa)
hypothetical protein Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_20467_23
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(13708..14496)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374AD9A
hypothetical protein Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_20467_24
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(14496..14819)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F1C72
hypothetical protein Tax=CG_Pacearch_02
rifcsplowo2_01_scaffold_20467_25
unknown

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comp(14816..15244)
DNA (429bp) protein (143aa)

This feature has no annotations

Displaying 25 items

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