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rifcsplowo2_01_scaffold_35810

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_35810_1
AR11, Woesearchaeaota, DPANN, Archaea

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1..252
DNA (252bp) protein (84aa)
Tax=AR11
rifcsplowo2_01_scaffold_35810_2
unknown

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262..1101
DNA (840bp) protein (280aa)
hypothetical protein
rifcsplowo2_01_scaffold_35810_3
CG_Woesearch_02, Woesearchaeota, Archaea

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1277..1552
DNA (276bp) protein (92aa)
50S ribosomal protein L34e n=1 Tax=Methanocaldococcus fervens (strain DSM 4213 / JCM 157852 / AG86) RepID=C7P883_METFA
LSU ribosomal protein l34e; K02915 large subunit ribosomal protein L34e Tax=CG_Woesearch_02
rpl34e; 50S ribosomal protein L34e
rifcsplowo2_01_scaffold_35810_4

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1549..1926
DNA (378bp) protein (126aa)
Large subunit ribosomal protein L14e {ECO:0000313|EMBL:KHO49049.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
50S ribosomal protein L14; K02875 large subunit ribosomal protein L14e id=5042328 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L14
rifcsplowo2_01_scaffold_35810_5
unknown

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1978..2889
DNA (912bp) protein (304aa)

This feature has no annotations

rifcsplowo2_01_scaffold_35810_6

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2994..3377
DNA (384bp) protein (128aa)
Putative uncharacterized protein PH0690 n=1 Tax=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) RepID=O58422_PYRHO
Uncharacterized protein {ECO:0000313|EMBL:KHO54769.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein
rifcsplowo2_01_scaffold_35810_7

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3347..3670
DNA (324bp) protein (108aa)
Nucleotidyltransferase n=1 Tax=uncultured archaeon GZfos13E1 RepID=Q64E87_9ARCH
DNA polymerase beta protein {ECO:0000313|EMBL:KHO54768.1}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
rifcsplowo2_01_scaffold_35810_8
AR9, Woesearchaeaota, DPANN, Archaea

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comp(3672..5321)
DNA (1650bp) protein (550aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20); K01890 phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20] Tax=AR9
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374A334
Phenylalanine-tRNA ligase beta subunit
rifcsplowo2_01_scaffold_35810_9
unknown

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5405..5848
DNA (444bp) protein (148aa)

This feature has no annotations

rifcsplowo2_01_scaffold_35810_10
AR9, Woesearchaeaota, DPANN, Archaea

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comp(5882..7219)
DNA (1338bp) protein (446aa)
Phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=AR9
Phenylalanine--tRNA ligase alpha subunit id=5800822 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Phenylalanine-tRNA ligase alpha subunit
rifcsplowo2_01_scaffold_35810_11

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7579..8040
DNA (462bp) protein (154aa)
ATP-dependent DNA helicase RecQ n=1 Tax=Lachnospiraceae bacterium 10-1 RepID=R9N0U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KKM05590.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATP-dependent DNA helicase RecQ
rifcsplowo2_01_scaffold_35810_12

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8042..8878
DNA (837bp) protein (279aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52503.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein id=5050981 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
phage antirepressor protein
rifcsplowo2_01_scaffold_35810_13
GWA1_OD1_36_12, Parcubacteria, Bacteria

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8944..10143
DNA (1200bp) protein (400aa)
Major Facilitator Superfamily transporter n=1 Tax=Thermoanaerobacter siderophilus SR4 RepID=I9KQX5_9THEO
Major facilitator superfamily MFS_1 Tax=GWA1_OD1_36_12
major facilitator superfamily protein
rifcsplowo2_01_scaffold_35810_14
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10325..10891)
DNA (567bp) protein (189aa)
hypothetical protein Tax=AR9
hypothetical protein id=5042335 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_35810_15
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(11180..12226)
DNA (1047bp) protein (349aa)
Cell division like protein pelota; K06965 protein pelota Tax=AR9
Protein pelota homolog id=5800182 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
mRNA surveillance protein Pelota
rifcsplowo2_01_scaffold_35810_16
unknown

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12280..12744
DNA (465bp) protein (155aa)

This feature has no annotations

rifcsplowo2_01_scaffold_35810_17
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

12853..14037
DNA (1185bp) protein (395aa)
id=5046362 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR9
rifcsplowo2_01_scaffold_35810_18
CG_PER_01, Peregrinibacteria, Bacteria

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14097..16151
DNA (2055bp) protein (685aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1ZME7_9BACT
hypothetical protein Tax=CG_PER_01
hypothetical protein
rifcsplowo2_01_scaffold_35810_19
unknown

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16148..16396
DNA (249bp) protein (83aa)

This feature has no annotations

rifcsplowo2_01_scaffold_35810_20
unknown

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16393..16938
DNA (546bp) protein (182aa)

This feature has no annotations

rifcsplowo2_01_scaffold_35810_21
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

17004..17528
DNA (525bp) protein (175aa)
glycerol 3-phosphate dehydrogenase (EC:1.1.1.94); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=AR9
glycerol-3-phosphate dehydrogenase (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Clostridium sp. CAG:245 RepID=R6B6E6_9CLOT
Displaying 21 items

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