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rifcsplowo2_01_scaffold_10078

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_10078_1
unknown

Not on your lists

comp(109..882)
DNA (774bp) protein (258aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10078_2
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(964..2334)
DNA (1371bp) protein (457aa)
Putative T5 A1-like protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U6L6_MYXSD
putative T5 A1-like protein Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
putative T5 A1-like protein
rifcsplowo2_01_scaffold_10078_3
unknown

Not on your lists

comp(2390..3097)
DNA (708bp) protein (236aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10078_4
unknown

Not on your lists

3228..4184
DNA (957bp) protein (319aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL Tax=AR20
SpoVT/AbrB protein
rifcsplowo2_01_scaffold_10078_5
unknown

Not on your lists

4272..5096
DNA (825bp) protein (275aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10078_6
GWD1_Spirochaetes_27_9_curated, Spirochaetes, Bacteria

Not on your lists

comp(5108..5650)
DNA (543bp) protein (181aa)
multiple antibiotic resistance (MarC)-like protein; K05595 multiple antibiotic resistance protein Tax=GWD1_Spirochaetes_27_9_curated
Multiple antibiotic resistance (MarC)-related protein id=3194368 bin=GWC1_Spirochaetes_27_15 species=Methanoregula boonei genus=Methanoregula taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
multiple antibiotic resistance (MarC)-like protein
rifcsplowo2_01_scaffold_10078_7

Not on your lists

comp(5767..6048)
DNA (282bp) protein (94aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C8224
RelE protein {ECO:0000313|EMBL:KHO53612.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
RelE protein
rifcsplowo2_01_scaffold_10078_8
unknown

Not on your lists

comp(6048..6248)
DNA (201bp) protein (67aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10078_9
unknown

Not on your lists

comp(6391..6843)
DNA (453bp) protein (151aa)
Transcriptional regulator, lrp family n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8C4_9ARCH id=5103635 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcriptional regulator, lrp family n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8C4_9ARCH Tax=AR20
Transcriptional regulator, lrp family
rifcsplowo2_01_scaffold_10078_10
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6948..8609
DNA (1662bp) protein (554aa)
asparagine synthetase B n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036C6F13
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EHR01467.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source
asparagine synthase
rifcsplowo2_01_scaffold_10078_11
unknown

Not on your lists

comp(8621..9343)
DNA (723bp) protein (241aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10078_12

Not on your lists

9441..10739
DNA (1299bp) protein (433aa)
Asparaginyl-tRNA synthetase {ECO:0000313|EMBL:KHO54542.1}; EC=6.1.1.22 {ECO:0000313|EMBL:KHO54542.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Asparaginyl-tRNA synthetase n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGF4_ACIB4 id=5103855 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Asparaginyl-tRNA synthetase
rifcsplowo2_01_scaffold_10078_13
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10765..12177
DNA (1413bp) protein (471aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] Tax=RBG_16_Pacearchaeota_35_8_curated
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase id=1928351 bin=GWE2_Spirochaete_31_10 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWE2_Spirochaete_31_10 organism_group=Spirochaetes organism_desc=Good +
rifcsplowo2_01_scaffold_10078_14
unknown

Not on your lists

12226..12945
DNA (720bp) protein (240aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10078_15
Methanomethylovorans hollandica, Methanomethylovorans, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(12956..14560)
DNA (1605bp) protein (535aa)
Sulfate permease-like transporter, MFS superfamily n=1 Tax=Methanomethylovorans hollandica (strain DSM 15978 / NBRC 107637 / DMS1) RepID=L0L0V7_METHD
sulfate permease-like transporter, MFS superfamily
Sulfate permease-like transporter, MFS superfamily {ECO:0000313|EMBL:AGB50585.1}; TaxID=867904 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanomethylovo
rifcsplowo2_01_scaffold_10078_16
unknown

Not on your lists

comp(14624..15550)
DNA (927bp) protein (309aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10078_17
Methanosaeta thermophila, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(15598..16389)
DNA (792bp) protein (264aa)
prephenate dehydratase (EC:4.2.1.51)
Prephenate dehydratase {ECO:0000313|EMBL:ABK14725.1}; EC=4.2.1.51 {ECO:0000313|EMBL:ABK14725.1};; TaxID=349307 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Me
Prephenate dehydratase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7Q1_METTP
rifcsplowo2_01_scaffold_10078_18
RBG_13_OD1_Falkowbacteria_39_14_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(16394..16651)
DNA (258bp) protein (86aa)
pheB; 3-deoxy-7-phosphoheptulonate synthase (EC:2.5.1.54); K04516 chorismate mutase [EC:5.4.99.5] Tax=RBG_13_OD1_Falkowbacteria_39_14_curated
Chorismate mutase/prephenate dehydratase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UXK3_CLOBO
P-protein
rifcsplowo2_01_scaffold_10078_19
unknown

Not on your lists

comp(16858..17469)
DNA (612bp) protein (204aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10078_20
unknown

Not on your lists

comp(17820..18161)
DNA (342bp) protein (114aa)

This feature has no annotations

rifcsplowo2_01_scaffold_10078_21

Not on your lists

18205..18831
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO54595.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
id=3688775 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_01_scaffold_10078_22
Microcoleus vaginatus, Microcoleus, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

18942..19388
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Microcoleus vaginatus FGP-2 RepID=F5UGT5_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:EGK87754.1}; TaxID=756067 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Microcoleus.;" source="Microcoleus vaginatus FGP-2.;"
hypothetical protein
rifcsplowo2_01_scaffold_10078_23

Not on your lists

19390..20334
DNA (945bp) protein (315aa)
Putative uncharacterized protein id=5800161 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61492.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsplowo2_01_scaffold_10078_24
R_OD1_Falkowbacteria_39_33, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(20331..20957)
DNA (627bp) protein (209aa)
hypothetical protein; K06992 Tax=RIFCSPLOWO2_01_FULL_OD1_Falkowbacteria_39_33_curated
hypothetical protein; K06992 id=9119 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
rifcsplowo2_01_scaffold_10078_25
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(21006..21995)
DNA (990bp) protein (330aa)
phospholipase D/transphosphatidylase Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
phospholipase D/transphosphatidylase id=5047537 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
phospholipase D/transphosphatidylase
rifcsplowo2_01_scaffold_10078_26
unknown

Not on your lists

comp(22290..23450)
DNA (1161bp) protein (387aa)
Transporter, monovalent cation:proton antiporter-2 family protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E279_CARML Tax=AR20
Transporter, monovalent cation:proton antiporter-2 family protein n=1 Tax=Carnobacterium maltaromaticum LMA28 RepID=K8E279_CARML id=5103851 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transporter, monovalent cation:proton antiporter-2 family protein
Displaying 26 items

View Taxonomy