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rifcsplowo2_01_scaffold_12833

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_12833_1
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(3..1481)
DNA (1479bp) protein (493aa)
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
ttj:TTHA1875 thrS; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=982218 bin=RAAC1_SR1 species=RAAC1_SR1 genus=RAAC1_SR1 taxon_order=RAAC1_SR1 taxon_class=RAAC1_SR1 phylum=SR1 tax=RAAC1_SR1 organism_group=SR1
hypothetical protein
rifcsplowo2_01_scaffold_12833_2
R_OD1_46_25, Parcubacteria, Bacteria

Not on your lists

comp(1516..2712)
DNA (1197bp) protein (399aa)
mannitol dehydrogenase; K00009 mannitol-1-phosphate 5-dehydrogenase [EC:1.1.1.17] Tax=RIFCSPLOWO2_01_FULL_OD1_46_25_curated
Mannitol-1-phosphate 5-dehydrogenase n=1 Tax=Erwinia sp. (strain Ejp617) RepID=E3DKK5_ERWSE
mtlD; mannitol-1-phosphate 5-dehydrogenase
rifcsplowo2_01_scaffold_12833_3
R_WOR_2_50_17, WOR-2, Bacteria

Not on your lists

2949..3791
DNA (843bp) protein (281aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_WOR_2_50_17_curated
DNA-damage-inducible protein D; K14623 DNA-damage-inducible protein D id=5044598 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_12833_4
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3796..4740)
DNA (945bp) protein (315aa)
Putative uncharacterized protein n=1 Tax=Candidatus Cloacamonas acidaminovorans RepID=B0VIN9_CLOAI id=87012 bin=ACD58 species=Candidatus Cloacimonas acidaminovorans genus=Candidatus Cloacimonas taxon_order=unknown taxon_class=unknown phylum=Cloacimonetes tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
hypothetical protein; K07027 Tax=AR17
rifcsplowo2_01_scaffold_12833_5
Methanococcoides burtonii, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(4743..5753)
DNA (1011bp) protein (337aa)
SAM-dependent methyltransferase n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TC9_METBU
methyltransferase
SAM-dependent methyltransferase {ECO:0000313|EMBL:ABE53297.1}; TaxID=259564 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methano
rifcsplowo2_01_scaffold_12833_6

Not on your lists

5855..6499
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51094.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
LmbE family protein id=5799631 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_12833_7

Not on your lists

6653..7633
DNA (981bp) protein (327aa)
Group 1 glycosyl transferase {ECO:0000313|EMBL:KHO51093.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
Glycosyl transferase group 1 id=5799630 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
group 1 glycosyl transferase
rifcsplowo2_01_scaffold_12833_8
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

7711..8259
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037902D9
Tax=AR17
rifcsplowo2_01_scaffold_12833_9

Not on your lists

8252..8716
DNA (465bp) protein (155aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035DE931
Marine sediment metagenome DNA, contig: S12H4_S23594 {ECO:0000313|EMBL:GAJ19586.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_12833_10
unknown

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comp(8719..9159)
DNA (441bp) protein (147aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12833_11
unknown

Not on your lists

comp(9156..9818)
DNA (663bp) protein (221aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12833_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

9966..10232
DNA (267bp) protein (89aa)
CopG family transcripitonal regulator n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000364B2FD
CopG family transcripitonal regulator Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_12833_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(10224..10706)
DNA (483bp) protein (161aa)
hypothetical protein
id=5045845 Tax=CG_Woesearch_02
id=5045845 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_12833_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

10776..11696
DNA (921bp) protein (307aa)
Transcription regulator (Homolog to phosphate uptake regulator) id=5041702 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcription regulator (Homolog to phosphate uptake regulator) Tax=AR4
rifcsplowo2_01_scaffold_12833_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

11737..12030
DNA (294bp) protein (98aa)
DNA polymerase beta domain-containing protein; K07075 Tax=CG_Aenigma_01
DNA polymerase beta domain-containing protein; K07075 id=5041690 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_01_scaffold_12833_16
R_OP11_Levybacteria_40_15b, Levybacteria, Microgenomates, Bacteria

Not on your lists

12027..12377
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IHL7_9PLAN
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_15b_curated
hypothetical protein
rifcsplowo2_01_scaffold_12833_17
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12390..13775)
DNA (1386bp) protein (462aa)
Kinase, CAMK CAMKL ; K07198 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11] id=5041703 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Kinase, CAMK CAMKL ; K07198 5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11] Tax=AR4
protein kinase
rifcsplowo2_01_scaffold_12833_18
unknown

Not on your lists

comp(13801..14088)
DNA (288bp) protein (96aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12833_19
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

14185..14421
DNA (237bp) protein (79aa)
id=5046822 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsplowo2_01_scaffold_12833_20
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14427..16136)
DNA (1710bp) protein (570aa)
PHP domain protein id=4935158 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PHP domain-containing protein
PHP domain protein {ECO:0000313|EMBL:AEG17910.1}; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacterium p
rifcsplowo2_01_scaffold_12833_21
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

16234..16701
DNA (468bp) protein (156aa)
NUDIX hydrolase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQS2_9BACT
NUDIX hydrolase Tax=RBG_16_Pacearchaeota_35_8_curated
mutT/nudix family protein
rifcsplowo2_01_scaffold_12833_22
unknown

Not on your lists

comp(16705..17265)
DNA (561bp) protein (187aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12833_23
unknown

Not on your lists

comp(17267..18127)
DNA (861bp) protein (287aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12833_24
CG_CPArch01-01, CG_CPArch01, Archaea

Not on your lists

18239..18448
DNA (210bp) protein (70aa)
leuS; leucyl-tRNA ligase (EC:6.1.1.4) Tax=CG_CPArch01-01
Leucyl-tRNA synthetase (EC:6.1.1.4)
Leucyl-tRNA synthetase n=1 Tax=Candidatus Methanomethylophilus alvus Mx1201 RepID=M9SE15_9EURY
rifcsplowo2_01_scaffold_12833_25

Not on your lists

18682..20991
DNA (2310bp) protein (770aa)
Leucyl-tRNA synthetase {ECO:0000313|EMBL:AGF92955.1}; EC=6.1.1.4 {ECO:0000313|EMBL:AGF92955.1};; TaxID=155900 species="unclassified sequences; environmental samples.;" source="uncultured organism.;"
leuS; leucine--tRNA ligase (EC:6.1.1.4)
Leucyl-tRNA synthetase n=1 Tax=uncultured organism RepID=M1PPE8_9ZZZZ
rifcsplowo2_01_scaffold_12833_26

Not on your lists


21223..21675
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52004.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Universal PUA-domain-containing protein id=5800007 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative RNA-binding protein
rifcsplowo2_01_scaffold_12833_27
unknown

Not on your lists

21725..22420
DNA (696bp) protein (232aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12833_28
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

22558..22776
DNA (219bp) protein (73aa)
hypothetical protein; K09005 hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
hypothetical protein; K09005 hypothetical protein id=5045955 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_12833_29
unknown

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comp(22784..22948)
DNA (165bp) protein (55aa)

This feature has no annotations

rifcsplowo2_01_scaffold_12833_30
unknown

Not on your lists

comp(23049..23471)
DNA (423bp) protein (141aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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