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rifcsplowo2_01_scaffold_18243

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_18243_1
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(123..662)
DNA (540bp) protein (180aa)
O-methyltransferase family 3 Tax=AR17
O-methyltransferase family 3 id=5800324 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
O-methyltransferase family protein
rifcsplowo2_01_scaffold_18243_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(659..1138)
DNA (480bp) protein (160aa)
RNA polymerase sigma-70 factor n=1 Tax=Brevibacillus laterosporus RepID=UPI000382AF5D
ECF subfamily RNA polymerase sigma-70 factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000716}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC
rifcsplowo2_01_scaffold_18243_3
R_RIF_OD1_11_45_15b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1309..1734
DNA (426bp) protein (142aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_11_45_15b_curated
Uncharacterized protein id=5799641 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_18243_4
unknown

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comp(1750..2286)
DNA (537bp) protein (179aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18243_5

Not on your lists

comp(2283..3314)
DNA (1032bp) protein (344aa)
UPF0176 protein IALB_0520 id=5800321 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:KHO52746.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
sulfurtransferase
rifcsplowo2_01_scaffold_18243_6
unknown

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3385..3897
DNA (513bp) protein (171aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18243_7
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

3904..4935
DNA (1032bp) protein (344aa)
truD; tRNA pseudouridine synthase D (EC:5.4.99.12)
Probable tRNA pseudouridine synthase D id=5799863 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Probable tRNA pseudouridine synthase D Tax=AR15
rifcsplowo2_01_scaffold_18243_8
unknown

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4983..5465
DNA (483bp) protein (161aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18243_9

Not on your lists

5931..6332
DNA (402bp) protein (134aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO45755.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
Uncharacterized protein id=5800343 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
zinc/iron permease
rifcsplowo2_01_scaffold_18243_10
CG_CP02_01, CG_CP02, Bacteria

Not on your lists

comp(6664..7014)
DNA (351bp) protein (117aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=CG_CP02_01
Adenylate kinase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8E8_HALXS
adenylate kinase
rifcsplowo2_01_scaffold_18243_11
Ammonifex degensii, Ammonifex, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6984..7274)
DNA (291bp) protein (97aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R7R9_AMMDK
adk; adenylate kinase
rifcsplowo2_01_scaffold_18243_12
unknown

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7292..7735
DNA (444bp) protein (148aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18243_13

Not on your lists

7770..8507
DNA (738bp) protein (246aa)
Protein-disulfide isomerase {ECO:0000313|EMBL:KKR45017.1}; Flags: Fragment;; TaxID=1618814 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_40_14.;"
dsbG; protein-disulfide isomerase id=4988 bin=ACD12 species=ACD12 genus=ACD12 taxon_order=ACD12 taxon_class=ACD12 phylum=OP11 tax=ACD12 organism_group=OP11 (Microgenomates) organism_desc= OP11
dsbG; protein-disulfide isomerase
rifcsplowo2_01_scaffold_18243_14
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8512..8979
DNA (468bp) protein (156aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00037ADF7A
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Vitamin K epoxide reductase
rifcsplowo2_01_scaffold_18243_15
Methanolobus psychrophilus, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9283..11598
DNA (2316bp) protein (772aa)
Peptidase U32 n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MP74_9EURY
peptidase U32
Peptidase U32 {ECO:0000313|EMBL:AFV23811.1}; TaxID=1094980 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus psychrophilus R
rifcsplowo2_01_scaffold_18243_16

Not on your lists

comp(11567..12676)
DNA (1110bp) protein (370aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAJ1_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39121.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
integrase
rifcsplowo2_01_scaffold_18243_17
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

12747..14891
DNA (2145bp) protein (715aa)
alanyl-tRNA synthetase; K01872 alanyl-tRNA synthetase [EC:6.1.1.7] Tax=CG_Pacearch_04
alaS2; alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Clostridium sp. CAG:571 RepID=R5XKF0_9CLOT
rifcsplowo2_01_scaffold_18243_18
unknown

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comp(14950..15267)
DNA (318bp) protein (106aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18243_19
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15264..15935)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-J21 RepID=UPI00037F544D
hypothetical protein; K03975 membrane-associated protein Tax=RBG_16_Deltaproteobacteria_47_11_curated
hypothetical protein
rifcsplowo2_01_scaffold_18243_20
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

16013..16447
DNA (435bp) protein (145aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
hypothetical protein id=5051029 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_18243_21
unknown

Not on your lists

16771..17733
DNA (963bp) protein (321aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18243_22
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(17725..17991)
DNA (267bp) protein (89aa)
putative transcription regulator Tax=CG_Pacearch_02
hypothetical protein
id=5103836 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_01_scaffold_18243_23
Methanothermobacter marburgensis, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

18100..18642
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Methanothermobacter marburgensis (strain DSM 2133 / 14651 / NBRC 100331 / OCM 82 / Marburg) RepID=D9PW55_METTM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL58453.1}; TaxID=79929 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanothermobacter.;" source="Methanother
rifcsplowo2_01_scaffold_18243_24
Enterococcus raffinosus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18608..19081
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Enterococcus raffinosus ATCC 49464 RepID=R2NRX9_9ENTE
Uncharacterized protein {ECO:0000313|EMBL:EOH73748.1}; TaxID=1158602 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus raffinosus ATCC 4946
rifcsplowo2_01_scaffold_18243_25
unknown

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19119..20603
DNA (1485bp) protein (495aa)

This feature has no annotations

rifcsplowo2_01_scaffold_18243_26
unknown

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20793..20885
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 26 items

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