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rifcsplowo2_01_scaffold_1456

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_1456_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(98..370)
DNA (273bp) protein (91aa)
snRNP Sm-like protein; K04796 small nuclear ribonucleoprotein Tax=RBG_13_Woesearchaeota_36_6_curated
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein id=5048697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Like-Sm ribonucleoprotein core
rifcsplowo2_01_scaffold_1456_2
unknown

Not on your lists

comp(401..856)
DNA (456bp) protein (152aa)
Transcriptional regulator, lrp family n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8C4_9ARCH id=5103635 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcriptional regulator, lrp family n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8C4_9ARCH Tax=AR20
Transcriptional regulator, lrp family
rifcsplowo2_01_scaffold_1456_3
unknown

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1047..2420
DNA (1374bp) protein (458aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1456_4
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2686..7074
DNA (4389bp) protein (1463aa)
hypothetical protein n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B5431C
hypothetical protein Tax=RBG_16_Deltaproteobacteria_71_12_curated
rifcsplowo2_01_scaffold_1456_5
unknown

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7117..7566
DNA (450bp) protein (150aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1456_6
unknown

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7590..8216
DNA (627bp) protein (209aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1456_7
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

8223..18878
DNA (10656bp) protein (3552aa)
UPI0003D1A86A related cluster n=1 Tax=unknown RepID=UPI0003D1A86A
Putative Ig domain-containing protein {ECO:0000313|EMBL:ETA68609.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Meth
Ig family protein
rifcsplowo2_01_scaffold_1456_8
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(18871..19740)
DNA (870bp) protein (290aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03660 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=RBG_13_Woesearchaeota_36_6_curated
Similar to 8-oxoguanine glycosylase (Hogg1) id=4795187 bin=GWC2_Planctomycete_KSU_39_26 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
AlkA; 3-methyladenine DNA glycosylase
rifcsplowo2_01_scaffold_1456_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

20014..20340
DNA (327bp) protein (109aa)
id=4744551 Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_1456_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20345..21475)
DNA (1131bp) protein (377aa)
Chaperone protein DnaJ Tax=AR11
Chaperone protein DnaJ id=5800476 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chaperone protein dnaJ
rifcsplowo2_01_scaffold_1456_11
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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comp(21499..22059)
DNA (561bp) protein (187aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BWY4_METCG
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
rifcsplowo2_01_scaffold_1456_12
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(22040..23902)
DNA (1863bp) protein (621aa)
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK Tax=CG_Woesearch_01
dnaK; molecular chaperone DnaK
dnaK; chaperone DnaK; K04043 molecular chaperone DnaK id=5241410 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_1456_13
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(23919..24470)
DNA (552bp) protein (184aa)
GrpE protein; K03687 molecular chaperone GrpE Tax=CG_Woesearch_01
Protein GrpE id=5799563 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
protein grpE
rifcsplowo2_01_scaffold_1456_14
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(24470..24922)
DNA (453bp) protein (151aa)
Heat shock protein Hsp20 n=1 Tax=Caloramator australicus RC3 RepID=G0V469_9CLOT
hsp20-2; chaperon, small heat shock protein Hsp20; K13993 HSP20 family protein Tax=CG_Woesearch_01
small heat shock protein
rifcsplowo2_01_scaffold_1456_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

25109..25573
DNA (465bp) protein (155aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048321 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_01_scaffold_1456_16
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(25586..26038)
DNA (453bp) protein (151aa)
hypothetical protein; K09152 hypothetical protein Tax=CG_Woesearch_01
hypothetical protein; K09152 hypothetical protein id=5049200 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_1456_17
Pyrococcus yayanosii, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

26749..27432
DNA (684bp) protein (228aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AG09_PYRYC
triosephosphate isomerase
rifcsplowo2_01_scaffold_1456_18
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

27769..29094
DNA (1326bp) protein (442aa)
elongation factor 1-alpha (EC:2.7.7.4); K03231 elongation factor 1-alpha id=5043694 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
translation elongation factor EF-1 subunit alpha; K03231 elongation factor 1-alpha Tax=CG_Woesearch_01
Elongation factor 1-alpha
rifcsplowo2_01_scaffold_1456_19
unknown

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comp(29205..30179)
DNA (975bp) protein (325aa)

This feature has no annotations

rifcsplowo2_01_scaffold_1456_20
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


30478..30789
DNA (312bp) protein (104aa)
rps10p; 30S ribosomal protein S10; K02946 small subunit ribosomal protein S10 Tax=CG_Woesearch_01
rps10p; 30S ribosomal protein S10P; K02946 small subunit ribosomal protein S10 id=5043958 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rps10p; 30S ribosomal protein S10P
rifcsplowo2_01_scaffold_1456_21
Negativicoccus succinicivorans, Negativicoccus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30779..31774
DNA (996bp) protein (332aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
UPI0003D5BA62 related cluster n=1 Tax=unknown RepID=UPI0003D5BA62
rifcsplowo2_01_scaffold_1456_22

Not on your lists

31913..32389
DNA (477bp) protein (159aa)
Prefoldin subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; GimC subunit alpha {ECO:0000256|HAMAP-Rule:MF_00308}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
GIM5; prefoldin subunit alpha; K04797 prefoldin alpha subunit id=5046872 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Prefoldin subunit alpha
rifcsplowo2_01_scaffold_1456_23

Not on your lists

32392..33486
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003751392
Marine sediment metagenome DNA, contig: S03H2_L00267 {ECO:0000313|EMBL:GAH34806.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Signal recognition particle GTPase
rifcsplowo2_01_scaffold_1456_24
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(33495..34163)
DNA (669bp) protein (223aa)
superfamily II helicase (EC:3.6.1.-); K03726 helicase [EC:3.6.4.-] id=5047477 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ski2-like helicase; K03726 helicase [EC:3.6.4.-] Tax=CG_Woesearch_01
DEAD/DEAH box helicase
rifcsplowo2_01_scaffold_1456_25

Not on your lists

34578..34790
DNA (213bp) protein (71aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO49598.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
AbrB/MazE/MraZ-like id=5241236 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_1456_26

Not on your lists

34802..35176
DNA (375bp) protein (125aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHO49597.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
PIN domain-like id=5241235 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_1456_27

Not on your lists

comp(35406..37406)
DNA (2001bp) protein (667aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
V-type H(+)-translocating pyrophosphatase (EC:3.6.1.1)
K(+)-insensitive pyrophosphate-energized proton pump id=5799711 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_1456_28
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

comp(37473..38747)
DNA (1275bp) protein (425aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=CG_Micra_06
phosphonopyruvate decarboxylase-like protein (EC:5.4.2.1)
Phosphonopyruvate decarboxylase-related protein id=3249352 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
rifcsplowo2_01_scaffold_1456_29

Not on your lists

comp(38737..40050)
DNA (1314bp) protein (438aa)
enolase (EC:4.2.1.11); K01689 enolase [EC:4.2.1.11] id=5048713 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
enolase (EC:4.2.1.11)
rifcsplowo2_01_scaffold_1456_30
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(40100..40906)
DNA (807bp) protein (269aa)
hypothetical protein; K07159 Tax=CG_Woesearch_02
hypothetical protein; K07159 id=5048712 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
Displaying items 1-30 of 32 in total

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