ggKbase home page

rifcsplowo2_01_scaffold_4801

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_4801_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(176..745)
DNA (570bp) protein (190aa)
50S ribosomal protein L15e; K02877 large subunit ribosomal protein L15e Tax=RBG_13_Woesearchaeota_36_6_curated
50S ribosomal protein L15e id=5799715 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
ribosomal protein L15e
rifcsplowo2_01_scaffold_4801_2

Not on your lists

892..1887
DNA (996bp) protein (332aa)
Bifunctional phosphoglucose/phosphomannose isomerase (Pgi-pmi) {ECO:0000313|EMBL:AIF00813.1}; EC=5.3.1.8 {ECO:0000313|EMBL:AIF00813.1};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental sa
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CN91_DESK7
rifcsplowo2_01_scaffold_4801_3
R_SM2F11_43_13, SM2F11, Bacteria

Not on your lists

1975..5379
DNA (3405bp) protein (1135aa)
Tax=RIFCSPHIGHO2_02_FULL_SM2F11_43_13_curated
rifcsplowo2_01_scaffold_4801_4
unknown

Not on your lists

5376..5576
DNA (201bp) protein (67aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4801_5
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(5615..5977)
DNA (363bp) protein (121aa)
PIN protein
PIN domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
PIN domain-containing protein id=5240975 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_4801_6
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(5974..6192)
DNA (219bp) protein (73aa)
Tax=CG_Pacearch_03
rifcsplowo2_01_scaffold_4801_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

6307..8469
DNA (2163bp) protein (721aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
intracellular protein transport protein Tax=CG_Woesearch_01
SMC protein
rifcsplowo2_01_scaffold_4801_8
unknown

Not on your lists

8662..10062
DNA (1401bp) protein (467aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4801_9
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

10499..12007
DNA (1509bp) protein (503aa)
hypothetical protein
transmembrane_regions Tax=CG_Woesearch_01
transmembrane_regions id=5043982 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_4801_10
unknown

Not on your lists

comp(12301..12762)
DNA (462bp) protein (154aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4801_11
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

13551..14225
DNA (675bp) protein (225aa)
Integrase catalytic region id=5049659 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Integrase catalytic region Tax=AR18
transposase
rifcsplowo2_01_scaffold_4801_12
unknown

Not on your lists

14950..15330
DNA (381bp) protein (127aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4801_13
unknown

Not on your lists

comp(15361..15693)
DNA (333bp) protein (111aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4801_14
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

16347..16571
DNA (225bp) protein (75aa)
DNA-directed RNA polymerase subunit H; K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=CG_Woesearch_01
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000373033A
DNA-directed RNA polymerase, subunit H
rifcsplowo2_01_scaffold_4801_15
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

16585..18081
DNA (1497bp) protein (499aa)
RNA polymerase subunit B; K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] Tax=CG_Woesearch_01
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5043972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_4801_16
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

18098..19897
DNA (1800bp) protein (600aa)
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] Tax=CG_Woesearch_01
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5043971 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_4801_17
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

19911..22505
DNA (2595bp) protein (865aa)
DNA-directed RNA polymerase, subunit a' (EC:2.7.7.6); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] Tax=CG_Woesearch_01
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_4801_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

22518..23663
DNA (1146bp) protein (382aa)
DNA-directed RNA polymerase subunit A''; K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] Tax=CG_Woesearch_02
rpoA2; DNA-directed RNA polymerase, subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_4801_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

23669..23935
DNA (267bp) protein (89aa)
NEQ179 Tax=AR11
NEQ179 id=5799591 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L30e
rifcsplowo2_01_scaffold_4801_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

23946..24371
DNA (426bp) protein (142aa)
NusA family KH domain-containing protein; K02600 N utilization substance protein A Tax=CG_Woesearch_02
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5043967 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
NusA family KH domain-containing protein
rifcsplowo2_01_scaffold_4801_21
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


24415..24852
DNA (438bp) protein (146aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=CG_Woesearch_01
30S ribosomal protein S12
rifcsplowo2_01_scaffold_4801_22
R_RIF_OD1_11_43_32b, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(24866..28156)
DNA (3291bp) protein (1097aa)
Peptidase S8 and S53 subtilisin kexin sedolisin n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QUV3_CHLT3
fibronectin type III domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_11_43_32b_curated
peptidase S8/S53 subtilisin kexin sedolisin
rifcsplowo2_01_scaffold_4801_23
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

28341..29165
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F65A1
hypothetical protein
hypothetical protein Tax=CG_Woesearch_01
rifcsplowo2_01_scaffold_4801_24
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

29266..30870
DNA (1605bp) protein (535aa)
hypothetical protein Tax=AR11
rifcsplowo2_01_scaffold_4801_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

30962..33622
DNA (2661bp) protein (887aa)
DEAD/H associated domain-containing protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=CG_Woesearch_02
ATP dependent helicase, lhr family; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] id=5049176 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
DEAD/H associated protein
rifcsplowo2_01_scaffold_4801_26
unknown

Not on your lists

33668..33976
DNA (309bp) protein (103aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4801_27
unknown

Not on your lists

34169..34804
DNA (636bp) protein (212aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4801_28
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(34791..34949)
DNA (159bp) protein (53aa)
ISA1214-6, ISORF2 n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28060_ARCFU
Putative transposon-encoded protein
Tax=CG_Woesearch_01
rifcsplowo2_01_scaffold_4801_29
GWA2_Deltaproteobacteria_45_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35038..35703
DNA (666bp) protein (222aa)
Transposase Tax=GWA2_Deltaproteobacteria_45_12_curated
Displaying 29 items

View Taxonomy