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rifcsplowo2_01_scaffold_178

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_178_1
R_OP11_Levybacteria_37_13, Levybacteria, Microgenomates, Bacteria

Not on your lists

136..591
DNA (456bp) protein (152aa)
hypothetical protein; K07002 Tax=RIFCSPHIGHO2_02_FULL_OP11_Levybacteria_37_13_curated
Putative uncharacterized protein id=4201023 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
hypothetical protein
rifcsplowo2_01_scaffold_178_2
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

641..1747
DNA (1107bp) protein (369aa)
carA; Carbamoylphosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=5046264 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
carA; Carbamoylphosphate synthase small subunit; K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RBG_13_OP8X_37_8_curated
carA; carbamoylphosphate synthase small subunit
rifcsplowo2_01_scaffold_178_3
unknown

Not on your lists

1741..2325
DNA (585bp) protein (195aa)

This feature has no annotations

rifcsplowo2_01_scaffold_178_4
Desulfobacca acetoxidans, Desulfobacca, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2322..3023
DNA (702bp) protein (234aa)
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NCV4_DESAR
glycerophosphoryl diester phosphodiesterase
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:AEB09385.1}; TaxID=880072 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Desulfobacca.;" sour
rifcsplowo2_01_scaffold_178_5
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3020..3520
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037BF6BB
NUDIX hydrolase Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
NUDIX hydrolase
rifcsplowo2_01_scaffold_178_6
RBG_19FT_COMBO_Aminicenantes_65_30_curated, Aminicenantes, Bacteria

Not on your lists

3517..6762
DNA (3246bp) protein (1082aa)
carB; Carbamoylphosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RBG_19FT_COMBO_Aminicenantes_65_30_curated
carB; Carbamoylphosphate synthase large subunit; K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=24410265 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
rifcsplowo2_01_scaffold_178_7
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

6803..7069
DNA (267bp) protein (89aa)
hypothetical protein id=5044251 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_178_8
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

7066..7407
DNA (342bp) protein (114aa)
hypothetical protein id=5044252 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
hypothetical protein
rifcsplowo2_01_scaffold_178_9
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

7420..8337
DNA (918bp) protein (306aa)
dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=CG_Woesearch_01
dihydroorotate dehydrogenase 1B (EC:1.3.98.1); K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=5041870 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
dihydroorotate dehydrogenase
rifcsplowo2_01_scaffold_178_10
unknown

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8383..8625
DNA (243bp) protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_178_11

Not on your lists

8622..9080
DNA (459bp) protein (153aa)
twitching motility protein PilT n=1 Tax=Thermococcus zilligii RepID=UPI00029B4E2D
Marine sediment metagenome DNA, contig: S01H4_S03397 {ECO:0000313|EMBL:GAG75592.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_178_12

Not on your lists

9085..9903
DNA (819bp) protein (273aa)
dihydroorotate dehydrogenase electron transfer subunit (EC:1.3.5.2); K02823 dihydroorotate dehydrogenase electron transfer subunit id=5091186 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Dihydroorotate dehydrogenase electron transfer subunit {ECO:0000313|EMBL:KHO50400.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
oxidoreductase FAD/NAD(P)-binding domain protein
rifcsplowo2_01_scaffold_178_13
unknown

Not on your lists

comp(9900..10970)
DNA (1071bp) protein (357aa)

This feature has no annotations

rifcsplowo2_01_scaffold_178_14
unknown

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comp(11037..11606)
DNA (570bp) protein (190aa)

This feature has no annotations

rifcsplowo2_01_scaffold_178_15
unknown

Not on your lists

comp(11613..12215)
DNA (603bp) protein (201aa)

This feature has no annotations

rifcsplowo2_01_scaffold_178_16

Not on your lists

12219..13052
DNA (834bp) protein (278aa)
hypothetical protein
id=5042256 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46754.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_178_17
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

13278..14564
DNA (1287bp) protein (429aa)
dihydroorotase (EC:3.5.2.5); K01465 dihydroorotase [EC:3.5.2.3] id=5041872 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
dihydroorotase (EC:3.5.2.5); K01465 dihydroorotase [EC:3.5.2.3] Tax=AR4
dihydroorotase (EC:3.5.2.3)
rifcsplowo2_01_scaffold_178_18
RBG_13_OP11_40_7b_curated, Microgenomates, Bacteria

Not on your lists

14554..15201
DNA (648bp) protein (216aa)
orotate phosphoribosyltransferase (EC:2.4.2.10) Tax=RBG_13_OP11_40_7b_curated
Orotate phosphoribosyltransferase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B2S5_HERA2
orotate phosphoribosyltransferase
rifcsplowo2_01_scaffold_178_19
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

15290..15895
DNA (606bp) protein (202aa)
Protein containing YHS domain protein id=5799612 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Protein containing YHS domain protein Tax=AR15
hypothetical protein
rifcsplowo2_01_scaffold_178_20
Candidatus Scalindua brodae, Candidatus Scalindua, Candidatus Brocadiales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15905..16720
DNA (816bp) protein (272aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KHE93718.1}; EC=4.1.1.23 {ECO:0000313|EMBL:KHE93718.1};; TaxID=237368 species="Bacteria; Planctomycetes; Planctomycetia; Candidatus Brocadiales;
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5041874 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23)
rifcsplowo2_01_scaffold_178_21
unknown

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comp(16780..17580)
DNA (801bp) protein (267aa)

This feature has no annotations

rifcsplowo2_01_scaffold_178_22
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(17787..18515)
DNA (729bp) protein (243aa)
Adenine phosphoribosyltransferase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LRP7_9EURY
PRPP-binding protein, adenine/guanine phosphoribosyltransferase Tax=CG_Woesearch_01
phosphoribosyltransferase
rifcsplowo2_01_scaffold_178_23
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

18527..19966
DNA (1440bp) protein (480aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase id=3537492 bin=GWF2_Ignavibacteria_33_9 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
adenylosuccinate synthetase Tax=GWF2_RIF_IGX_33_9_curated
rifcsplowo2_01_scaffold_178_24
unknown

Not on your lists

19963..20529
DNA (567bp) protein (189aa)

This feature has no annotations

rifcsplowo2_01_scaffold_178_25
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

20526..21161
DNA (636bp) protein (212aa)
IMP cyclohydrolase (EC:3.5.4.10 2.1.2.3); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] Tax=RBG_16_Zixibacteria_40_9_curated
phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3)
Phosphoribosylaminoimidazolecarboxamide formyltransferase n=1 Tax=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) RepID=A8ZZG6_DESOH
rifcsplowo2_01_scaffold_178_26
GWC2_Nitrospirae_57_13_curated, Nitrospirae, Bacteria

Not on your lists

21163..22395
DNA (1233bp) protein (411aa)
IMP cyclohydrolase (EC:3.5.4.10); K00602 phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10] Tax=GWC2_Nitrospirae_57_13_curated
phosphoribosylaminoimidazolecarboxamide formyltransferase (EC:2.1.2.3)
AICARFT/IMPCHase bienzyme id=3252809 bin=GWC2_Nitrospirae_57_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
rifcsplowo2_01_scaffold_178_27
unknown

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comp(22385..24610)
DNA (2226bp) protein (742aa)

This feature has no annotations

rifcsplowo2_01_scaffold_178_28
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

24813..26267
DNA (1455bp) protein (485aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=GWA1_Bdellovibrionales_52_35_curated
Amidophosphoribosyltransferase id=3259895 bin=GWA1_Deltaproteobacteria_52_35 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis!
amidophosphoribosyltransferase
rifcsplowo2_01_scaffold_178_29
RBG_16_Deltaproteobacteria_48_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26270..26953
DNA (684bp) protein (228aa)
hypothetical protein Tax=RBG_16_Deltaproteobacteria_48_10_curated
Conserved protein id=3930141 bin=GWF2_Nitrospirae_44_13 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
class I glutamine amidotransferase
rifcsplowo2_01_scaffold_178_30
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26964..29096
DNA (2133bp) protein (711aa)
phosphoribosylamine--glycine ligase (EC:6.3.4.13); K01945 phosphoribosylamine--glycine ligase [EC:6.3.4.13] Tax=CG_Syntroph_01
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase id=2771237 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
Displaying items 1-30 of 106 in total

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