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rifcsplowo2_01_scaffold_1529_3

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_50_15

near complete RP 36 / 55 MC: 3 BSCG 5 / 51 ASCG 32 / 38 MC: 4
Location: comp(2222..3445)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CF84_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 38.6
  • Coverage: 324.0
  • Bit_score: 169
  • Evalue 6.40e-39
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 38.6
  • Coverage: 324.0
  • Bit_score: 169
  • Evalue 1.80e-39
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 38.6
  • Coverage: 324.0
  • Bit_score: 169
  • Evalue 9.00e-39

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Taxonomy

Thermobaculum terrenum → Thermobaculum → Bacteria

Sequences

DNA sequence
Length: 1224
ATGCCAGCTAAACATCCTGCATCAGCAAACCCGTCGATACAAGCAGGTCTTGATGTTATCATGGCAGACAAAAGCTACACGATTTATGACATTCTTGAATTAACAAACCTGCCAGAGGACGAAATAATACGGGCAGCCAGGAATGGAAAGCTGAGCTTCTCAGAAACAAAGCCAAGGCCCCTGATGACCGGCGAGTCGGTAATAAGATATCTCATGGAAAAAGATGCGGCAGGGCGGGGACATCAGATTCCAGAGCCAGCGGCCGCTGATTACGAAGGCAGCGACACGCCAGATGCGTTGCATATGACTGATGCTGAAATGGAAGCGGCGCTTCGCAGGACTGGGTTGAATTGGAGGCAGAATAACTATCTCGATGTATTCTACGCATACACTCTGTCAATCCCCCTCCTGACCCCTGTGCAGGAAGTTTCAATCGGCAGGAGGATACATGCGCAGGAGCCGGGCTGGGAGGATGCGCTTAGGCAAGGAGTTGAGGCAAACTACCGCCTTGCCTTCTGGTGCGCCAGCAAATTTGCCGGCGGATTAACTCACCTTCAAATGGGGGACCTGGTGCAGGAGGGCGTAATAGGGCTTTACACTGCATGGAAGGGATACAACCCTGACCACCGTAAAGAAGGGGAAGAGAATCGCACTTCCCCGTACAGGTTCACAACCTACGCCACGCCGTGGGTGAAGCAGGCAATCAGACGAGCAATAGAAAACGCTGAGAGGACTATTCGGCTGCCTACGCATGCCATTAATCTGAAATCAAGAATAAACCTCCTCAAGGGGCAGCTTGAGCAAAGCACAGGAATGGCACCCACGCTTGAACAGATTGCAGAAATGACACGAACAGATAAGGAAATCCTTTCAGCAATAATGGCTCCTGATTCTTTCTCGTTGGAGAGATATCTGACAAAAATGCAAGAGCTGGTGGAACAATTGCAACTGGATGAAATCGTGCCTGATACTCAGCCGACACCGGAAGAGCAGGCCATAGATACAATTTACGGGGAAACGATTGTTGCCGGGCTGGATGACGCCCTGGCTGAAAGGCTTTCATTTGTCATAAAACAGCGCTTCGGCTTCAATGAAACGGGCGAGGTACAGAGCCTGGAAAAGATTGGGCGACAGAGAGGCGTCACAAGGGAAAGGGTAAGGCAGCTTGAAAGAAAAGCGCTTAATCAGCTGCGCAATAATTCGGAATTCATGAAGAAGCTTTGA
PROTEIN sequence
Length: 408
MPAKHPASANPSIQAGLDVIMADKSYTIYDILELTNLPEDEIIRAARNGKLSFSETKPRPLMTGESVIRYLMEKDAAGRGHQIPEPAAADYEGSDTPDALHMTDAEMEAALRRTGLNWRQNNYLDVFYAYTLSIPLLTPVQEVSIGRRIHAQEPGWEDALRQGVEANYRLAFWCASKFAGGLTHLQMGDLVQEGVIGLYTAWKGYNPDHRKEGEENRTSPYRFTTYATPWVKQAIRRAIENAERTIRLPTHAINLKSRINLLKGQLEQSTGMAPTLEQIAEMTRTDKEILSAIMAPDSFSLERYLTKMQELVEQLQLDEIVPDTQPTPEEQAIDTIYGETIVAGLDDALAERLSFVIKQRFGFNETGEVQSLEKIGRQRGVTRERVRQLERKALNQLRNNSEFMKKL*