ggKbase home page

rifcsplowo2_01_scaffold_1529_5

Organism: RIFCSPLOWO2_01_FULL_Archaea_Woesearchaeota_50_15

near complete RP 36 / 55 MC: 3 BSCG 5 / 51 ASCG 32 / 38 MC: 4
Location: 3848..4465

Top 3 Functional Annotations

Value Algorithm Source
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5043662 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b similarity UNIREF
DB: UNIREF100
  • Identity: 57.7
  • Coverage: 222.0
  • Bit_score: 224
  • Evalue 1.10e-55
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 57.7
  • Coverage: 222.0
  • Bit_score: 224
  • Evalue 1.60e-55
LSU ribosomal protein L24A Rpl24A similarity KEGG
DB: KEGG
  • Identity: 69.3
  • Coverage: 150.0
  • Bit_score: 204
  • Evalue 2.60e-50

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR3 → Archaea

Sequences

DNA sequence
Length: 618
ATGACTGATGACGAAAAAGAGCAGGACATAAGCTTTGATGCAGAGGAGGACGTATTTGCCCCTCCGAAGAAAGAGGAAACGGCTCCGAAGGTTGAAAAAGCCAAGGAAGCCCCTGCTGTCGAGCATGAGGAAAGGATGCCGATATTTGCACTTCGCACGACTGCAAACAGGGAAGAGCAGGTGATGGACTTCGTATCATCCAACGCCAAAAAGAGGGGATTGGCTGTTTACTCTCTCATCCATCCACATGGCATGAGAAGCTACATTTTTGTTGAAGCGAAGACAAGGCAGGACGCCGAGCAGGCATCGTTCCGTGTGCCTTACGCCCGTGGCCTCCTTGACAAGGAAATCGCATATGAAGAGATTGAGCACATGCTTGAGCCAAGCAAGAAGGTGGAGGTCAACATCCAAAAAGGCGATATTGTTGAAATAATAAGCGGGGCTGCTTTCAAGCACTCGCAAGCCAAGGTAACAAGGCTTGACAAGACAAAGGAGGATGTTGTGGTTGAGCTCCTTGAATCGGCAGTTCCAATACCCATAACGCTTAAAATGGATGCAGTGAAGGTGATAAGGAGGGAATCGGATGAAGGCGACGCATCCCAGCACATCGATGAGTAG
PROTEIN sequence
Length: 206
MTDDEKEQDISFDAEEDVFAPPKKEETAPKVEKAKEAPAVEHEERMPIFALRTTANREEQVMDFVSSNAKKRGLAVYSLIHPHGMRSYIFVEAKTRQDAEQASFRVPYARGLLDKEIAYEEIEHMLEPSKKVEVNIQKGDIVEIISGAAFKHSQAKVTRLDKTKEDVVVELLESAVPIPITLKMDAVKVIRRESDEGDASQHIDE*