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rifcsphigho2_02_scaffold_4737

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_4737_1
Photobacterium leiognathi, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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135..602
DNA (468bp) protein (156aa)
YbaK / prolyl-tRNA synthetases associated domain protein n=1 Tax=Photobacterium leiognathi subsp. mandapamensis svers.1.1. RepID=F2PAZ1_PHOMO
YbaK / prolyl-tRNA synthetases associated domain protein {ECO:0000313|EMBL:GAA05077.1}; TaxID=1001530 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.
regulatory protein
rifcsphigho2_02_scaffold_4737_2
unknown

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comp(606..1115)
DNA (510bp) protein (170aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4737_3
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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comp(1198..2223)
DNA (1026bp) protein (342aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
Putative uncharacterized protein id=4885633 bin=GWC2_Ignavibacteria_38_9 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
hypothetical protein
rifcsphigho2_02_scaffold_4737_4
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(2564..5272)
DNA (2709bp) protein (903aa)
valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=CG_Pacearch_04
Valine--tRNA ligase id=5800309 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Valine-tRNA ligase
rifcsphigho2_02_scaffold_4737_5
CG_Woesearch_02, Woesearchaeota, Archaea

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5442..6674
DNA (1233bp) protein (411aa)
replication factor C large subunit; K04800 replication factor C large subunit Tax=CG_Woesearch_02
replication factor C large subunit; K04800 replication factor C large subunit id=5048465 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
replication factor C large subunit
rifcsphigho2_02_scaffold_4737_6
unknown

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comp(6710..7210)
DNA (501bp) protein (167aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4737_7
unknown

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comp(7216..8265)
DNA (1050bp) protein (350aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4737_8
Geoglobus ahangari, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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comp(8262..9338)
DNA (1077bp) protein (359aa)
Diaminopimelate epimerase {ECO:0000313|EMBL:AKG91038.1}; EC=5.1.1.7 {ECO:0000313|EMBL:AKG91038.1};; TaxID=113653 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geogl
Diaminopimelate epimerase n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIA7_9EURY
Diaminopimelate epimerase
rifcsphigho2_02_scaffold_4737_9
unknown

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9574..10731
DNA (1158bp) protein (386aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4737_10

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10910..11569
DNA (660bp) protein (220aa)
hypothetical protein id=5046025 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45835.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
hypothetical protein
rifcsphigho2_02_scaffold_4737_11

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12029..13588
DNA (1560bp) protein (520aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase id=5799897 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glycyl-tRNA synthetase {ECO:0000313|EMBL:AJF61228.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_4737_12
unknown

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comp(13935..14390)
DNA (456bp) protein (152aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4737_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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14547..15221
DNA (675bp) protein (225aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362D490
hypothetical protein; K06930 Tax=RBG_13_Pacearchaeota_36_9_curated
DNA binding protein
rifcsphigho2_02_scaffold_4737_14
unknown

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15365..16498
DNA (1134bp) protein (378aa)

This feature has no annotations

rifcsphigho2_02_scaffold_4737_15
RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated, Roizmannbacteria, Microgenomates, Bacteria

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16482..17951
DNA (1470bp) protein (490aa)
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] Tax=RIFOXYB2_FULL_OP11_Roizmanbacteria_38_10_curated
phosphoenolpyruvate synthase; K01007 pyruvate, water dikinase [EC:2.7.9.2] id=5046028 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
PEP-utilizing protein mobile subunit
rifcsphigho2_02_scaffold_4737_16
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

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17961..19082
DNA (1122bp) protein (374aa)
Phosphoenolpyruvate synthase/pyruvate phosphate dikinase Tax=GWC2_OD1_37_14
Displaying 16 items

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