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rifcsphigho2_02_scaffold_9320

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_9320_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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271..537
DNA (267bp) protein (89aa)
id=5051524 Tax=RBG_13_Woesearchaeota_36_6_curated
id=5051524 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsphigho2_02_scaffold_9320_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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513..917
DNA (405bp) protein (135aa)
PilT protein domain protein n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8EA35_9FIRM
PilT domain-containing protein Tax=RBG_13_Woesearchaeota_36_6_curated
PilT domain-containing protein
rifcsphigho2_02_scaffold_9320_3
unknown

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comp(960..1610)
DNA (651bp) protein (217aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9320_4
CG_Woesearch_02, Woesearchaeota, Archaea

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1840..2502
DNA (663bp) protein (221aa)
O-sialoglycoprotein endopeptidase; K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] Tax=CG_Woesearch_02
O-sialoglycoprotein endopeptidase id=5800366 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
O-sialoglycoprotein endopeptidase
rifcsphigho2_02_scaffold_9320_5
unknown

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2810..3784
DNA (975bp) protein (325aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9320_6
unknown

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comp(3841..5211)
DNA (1371bp) protein (457aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9320_7
unknown

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comp(5361..6875)
DNA (1515bp) protein (505aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9320_8

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7048..7776
DNA (729bp) protein (243aa)
riboflavin kinase, archaea type (EC:2.7.1.161)
riboflavin/FAD biosynthesis transcriptional regulator (EC:2.7.1.161); K07732 riboflavin kinase, archaea type [EC:2.7.1.161] id=5241330 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Riboflavin kinase, archaea type {ECO:0000313|EMBL:AJF60321.1}; EC=2.7.1.161 {ECO:0000313|EMBL:AJF60321.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_9320_9
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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7792..8259
DNA (468bp) protein (156aa)
riboflavin synthase (EC:2.5.1.9)
Riboflavin synthase {ECO:0000256|PIRNR:PIRNR015750}; EC=2.5.1.9 {ECO:0000256|PIRNR:PIRNR015750};; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methano
Riboflavin synthase n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALB2_METOI
rifcsphigho2_02_scaffold_9320_10
Methanothermus fervidus, Methanothermus, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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8320..8820
DNA (501bp) protein (167aa)
6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYK4_METFV
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
rifcsphigho2_02_scaffold_9320_11
RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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9043..9645
DNA (603bp) protein (201aa)
ribA; riboflavin biosynthesis protein; K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] Tax=RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated
Riboflavin biosynthesis protein RibBA n=1 Tax=Clostridium difficile CD160 RepID=T3DC01_CLODI
riboflavin biosynthesis protein
rifcsphigho2_02_scaffold_9320_12
Halanaerobium praevalens, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

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9710..10318
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Halanaerobium praevalens (strain ATCC 33744 / DSM 2228 / GSL) RepID=E3DPC9_HALPG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO76680.1}; TaxID=572479 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halanaerobium.;" source="Halanaerobium praevalens (str
rifcsphigho2_02_scaffold_9320_13
unknown

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comp(10367..11155)
DNA (789bp) protein (263aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9320_14
unknown

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comp(11202..11888)
DNA (687bp) protein (229aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9320_15
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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12186..13619
DNA (1434bp) protein (478aa)
Beta-lactamase n=2 Tax=Natronorubrum tibetense RepID=L9VWZ8_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELY41522.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
beta-lactamase
rifcsphigho2_02_scaffold_9320_16
unknown

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13897..14292
DNA (396bp) protein (132aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9320_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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15220..15600
DNA (381bp) protein (127aa)
30S ribosomal protein S8e n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXJ1_METFV
30S ribosomal protein S8; K02995 small subunit ribosomal protein S8e Tax=RBG_13_Woesearchaeota_36_6_curated
30S ribosomal protein S8e
rifcsphigho2_02_scaffold_9320_18
unknown

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comp(15701..16294)
DNA (594bp) protein (198aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9320_19
unknown

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comp(16323..16895)
DNA (573bp) protein (191aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9320_20
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17323..18399)
DNA (1077bp) protein (359aa)
Putative metal-dependent enzyme n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZF7_CLOCD
putative metal-dependent enzyme
Putative metal-dependent enzyme {ECO:0000313|EMBL:AEV66820.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clarifla
rifcsphigho2_02_scaffold_9320_21
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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18639..19514
DNA (876bp) protein (292aa)
pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] id=5094819 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
Pyridoxal biosynthesis lyase PdxS, pyridoxine biosynthesis protein {ECO:0000313|EMBL:KKP38137.1}; EC=4.-.-.- {ECO:0000313|EMBL:KKP38137.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" sourc
pyridoxal phosphate synthase yaaD subunit
rifcsphigho2_02_scaffold_9320_22
RBG_19FT_COMBO_Actinobacteria_36_27_curated, Actinobacteria, Bacteria

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19564..20172
DNA (609bp) protein (203aa)
glutamine amidotransferase subunit PdxT; K08681 glutamine amidotransferase [EC:2.6.-.-] Tax=RBG_19FT_COMBO_Actinobacteria_36_27_curated
Glutamine amidotransferase subunit PdxT n=2 Tax=Thermosipho africanus RepID=PDXT_THEAB
glutamine amidotransferase subunit PdxT
rifcsphigho2_02_scaffold_9320_23
CG_Woesearch_02, Woesearchaeota, Archaea

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20231..21145
DNA (915bp) protein (305aa)
Fibronectin-binding A domain protein n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYX7_METFV
hypothetical protein Tax=CG_Woesearch_02
fibronectin-binding a domain-containing protein
rifcsphigho2_02_scaffold_9320_24

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21422..22699
DNA (1278bp) protein (426aa)
Proteinase inhibitor I4 serpin n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RK56_METP4
Marine sediment metagenome DNA, contig: S03H2_C00964 {ECO:0000313|EMBL:GAH27292.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
proteinase inhibitor I4 serpin
rifcsphigho2_02_scaffold_9320_25
AR19, Pacearchaeaota, DPANN, Archaea

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22732..23643
DNA (912bp) protein (304aa)
hypothetical protein Tax=AR19
hypothetical protein id=5048280 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_02_scaffold_9320_26
unknown

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24035..24373
DNA (339bp) protein (113aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9320_27
unknown

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24607..24864
DNA (258bp) protein (86aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9320_28
Thermoproteus tenax, Thermoproteus, Thermoproteales, Thermoprotei, Crenarchaeota, Archaea

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24985..26520
DNA (1536bp) protein (512aa)
Predicted sugar kinase, YjeF-related n=1 Tax=Thermoproteus tenax (strain ATCC 35583 / NBRC 100435 / JCM 9277 / Kra 1) RepID=G4RM42_THETK rbh
putative sugar kinase
Predicted sugar kinase, YjeF-related {ECO:0000313|EMBL:CCC82637.1}; TaxID=768679 species="Archaea; Crenarchaeota; Thermoprotei; Thermoproteales; Thermoproteaceae; Thermoproteus.;" source="Thermoproteu
rifcsphigho2_02_scaffold_9320_29
CG_Woesearch_02, Woesearchaeota, Archaea

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26611..27882
DNA (1272bp) protein (424aa)
sodium/hydrogen exchanger Tax=CG_Woesearch_02
sodium/hydrogen exchanger id=5043948 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transporter, CPA2 family
Displaying 29 items

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