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rifcsphigho2_02_scaffold_2865

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2865_1
unknown

Not on your lists

1..84
DNA (84bp) protein (28aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2865_2

Not on your lists

comp(323..919)
DNA (597bp) protein (199aa)
Small-conductance mechanosensitive channel n=2 Tax=Thermococcus RepID=G0HKF9_THES4 id=5103554 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Small-conductance mechanosensitive channel
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AJF62835.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_02_scaffold_2865_3

Not on your lists

comp(1128..3212)
DNA (2085bp) protein (695aa)
Cell surface protein; K07114 uncharacterized protein id=5046289 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46090.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Cell surface protein
rifcsphigho2_02_scaffold_2865_4

Not on your lists

3496..3927
DNA (432bp) protein (144aa)
id=5046299 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46100.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_2865_5
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

4053..4523
DNA (471bp) protein (157aa)
hypothetical protein
id=5800197 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR15
rifcsphigho2_02_scaffold_2865_6
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

4712..5179
DNA (468bp) protein (156aa)
hypothetical protein
id=5800196 Tax=CG_Woesearch_01
id=5103666 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_02_scaffold_2865_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

5368..6096
DNA (729bp) protein (243aa)
cell division ATPase MinD; K03609 septum site-determining protein MinD id=5044126 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cell division ATPase MinD; K03609 septum site-determining protein MinD Tax=AR18
minD-1; cell division inhibitor
rifcsphigho2_02_scaffold_2865_8
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

6201..6713
DNA (513bp) protein (171aa)
id=5048391 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_02_scaffold_2865_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

7541..7954
DNA (414bp) protein (138aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein id=5041664 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_2865_10
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

8177..11851
DNA (3675bp) protein (1225aa)
AAA family ATPase, CDC48 subfamily (EC:3.6.1.3); K13525 transitional endoplasmic reticulum ATPase Tax=CG_Micra_05
AAA family ATPase, CDC48 subfamily id=5799990 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
AAA family ATPase, CDC48 subfamily
rifcsphigho2_02_scaffold_2865_11
unknown

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11848..12063
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2865_12
unknown

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12308..13171
DNA (864bp) protein (288aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2865_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13241..14446
DNA (1206bp) protein (402aa)
radical SAM protein; K06935 Tax=CG_Woesearch_02
radical SAM protein; K06935 id=5048707 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
molybdenum cofactor biosynthesis protein A
rifcsphigho2_02_scaffold_2865_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

14861..16285
DNA (1425bp) protein (475aa)
glutamyl-tRNA(Gln) amidotransferase, subunit D; K09482 glutamyl-tRNA(Gln) amidotransferase subunit D [EC:6.3.5.7] Tax=CG_Woesearch_02
Glutamyl-tRNA(Gln) amidotransferase subunit D id=5800300 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Glutamyl-tRNA(Gln) amidotransferase subunit D
rifcsphigho2_02_scaffold_2865_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16327..17631)
DNA (1305bp) protein (435aa)
hypothetical protein n=1 Tax=Crenarchaeota archaeon SCGC AAA471-B05 RepID=UPI0003626E30
glycosyl transferase group 1 Tax=CG_Woesearch_02
glycosyl transferase, group 1
rifcsphigho2_02_scaffold_2865_16
R_OP11_Gottesmanbacteria_39_11, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(17708..19417)
DNA (1710bp) protein (570aa)
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI00037240BA rbh
putative carbamoyl transferase, NodU family Tax=RIFCSPHIGHO2_02_FULL_OP11_Gottesmanbacteria_39_11_curated
putative carbamoyl transferase, NodU family
rifcsphigho2_02_scaffold_2865_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(19574..20791)
DNA (1218bp) protein (406aa)
Glycosyl transferase family 2 n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0TBM7_METSL
family 2 glycosyl transferase Tax=CG_Woesearch_02
family 2 glycosyl transferase
rifcsphigho2_02_scaffold_2865_18
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(21109..22551)
DNA (1443bp) protein (481aa)
radical SAM protein Tax=RBG_13_Nitrospirae_39_12_curated
Similar to Mg-protoporphyrin monomethylester cyclase id=4853129 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
radical SAM domain-containing protein
rifcsphigho2_02_scaffold_2865_19

Not on your lists

comp(22859..23821)
DNA (963bp) protein (321aa)
rfbB-1; dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
NAD-dependent epimerase/dehydratase family protein id=5800153 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
NAD-dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:AJF61484.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
rifcsphigho2_02_scaffold_2865_20

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comp(23901..24806)
DNA (906bp) protein (302aa)
UPI000288CD32 related cluster id=5045687 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54354.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Integral membrane protein
rifcsphigho2_02_scaffold_2865_21
unknown

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25024..25377
DNA (354bp) protein (118aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2865_22
Methanocella paludicola, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

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comp(25444..26619)
DNA (1176bp) protein (392aa)
Putative aminotransferase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YWZ6_METPS
putative aminotransferase
Putative aminotransferase {ECO:0000313|EMBL:BAI60968.1}; TaxID=304371 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocella paludico
rifcsphigho2_02_scaffold_2865_23
Pyrococcus abyssi, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(26669..27646)
DNA (978bp) protein (326aa)
GalE-1 UDP-glucose 4-epimerase n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9V1X1_PYRAB
galE-1; UDP-glucose 4-epimerase
GalE-1 UDP-glucose 4-epimerase {ECO:0000313|EMBL:CAB49227.1}; UDP-glucose 4-epimerase {ECO:0000313|EMBL:CCE69681.1}; TaxID=272844 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermoco
rifcsphigho2_02_scaffold_2865_24
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27790..28956)
DNA (1167bp) protein (389aa)
group 1 glycosyl transferase id=15194303 bin=GWC2_NOV_55_46 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GWC2_NOV_55_46 organism_group=Proteobacteria
group 1 glycosyl transferase Tax=GWC2_Deltaproteobacteria_55_46b_curated
glycogen synthase
rifcsphigho2_02_scaffold_2865_25
CG_Bacteroid_02, Bacteroidetes, Bacteria

Not on your lists

comp(29115..29588)
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Desulfovibrio piezophilus (strain DSM 21447 / JCM 15486 / C1TLV30) RepID=M1WM90_DESPC
hypothetical protein Tax=CG_Bacteroid_02
hypothetical protein
rifcsphigho2_02_scaffold_2865_26
GWA2_OP11_38_24, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

comp(29639..30625)
DNA (987bp) protein (329aa)
putative dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9WZY8_9FIRM
3-beta hydroxysteroid dehydrogenase/isomerase family protein {ECO:0000313|EMBL:KKQ66368.1}; TaxID=1618422 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_
rifcsphigho2_02_scaffold_2865_27
GWC2_Deltaproteobacteria_55_46b_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30887..32410)
DNA (1524bp) protein (508aa)
Fe-S protein, radical SAM family id=4434599 bin=GWC2_Deltaproteobacteria_55_46 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_55_46 organism_group=Deltaproteobacteria organism_desc=Clade sibling to the Geobacter/Pelobacter
Fe-S oxidoreductase Tax=GWC2_Deltaproteobacteria_55_46b_curated
radical SAM protein
rifcsphigho2_02_scaffold_2865_28
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

Not on your lists

comp(32395..33525)
DNA (1131bp) protein (377aa)
NAD-dependent epimerase/dehydratase Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
NAD-dependent epimerase/dehydratase
NAD-dependent epimerase/dehydratase id=5241071 bin=GW2011_AR10_complete species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_2865_29
R_OD1_Yanofskybacteria_38_22b, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

33723..34862
DNA (1140bp) protein (380aa)
Glycosyl transferase, group 1 n=1 Tax=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) RepID=A4FZH1_METM5
group 1 glycosyl transferase Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_38_22b_curated
group 1 glycosyl transferase
rifcsphigho2_02_scaffold_2865_30
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(35068..35970)
DNA (903bp) protein (301aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EF829
Glycosyl transferase family 2 Tax=GWA2_OD1_40_9
Glycosyltransferases involved in cell wall biogenesis
Displaying items 1-30 of 38 in total

View Taxonomy