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rifcsphigho2_02_scaffold_11062

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_11062_1

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comp(2..442)
DNA (441bp) protein (147aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM81902.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rifcsphigho2_02_scaffold_11062_2
RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated, Falkowbacteria, Parcubacteria, Bacteria

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836..1303
DNA (468bp) protein (156aa)
Transposase n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AHF7_PYRYC
transposase IS200-family protein; K07491 putative transposase Tax=RIFOXYC2_FULL_OD1_Falkowbacteria_36_12_curated
transposase
rifcsphigho2_02_scaffold_11062_3
unknown

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1487..2200
DNA (714bp) protein (238aa)

This feature has no annotations

rifcsphigho2_02_scaffold_11062_4

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comp(2526..3431)
DNA (906bp) protein (302aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Protease HtpX homolog id=5799559 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
peptidase M48 Ste24p
rifcsphigho2_02_scaffold_11062_5
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(3631..4956)
DNA (1326bp) protein (442aa)
DNA primase Tax=CG_Woesearch_03
DNA primase id=5048471 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_11062_6
unknown

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comp(5228..5326)
DNA (99bp) protein (33aa)

This feature has no annotations

rifcsphigho2_02_scaffold_11062_7

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5649..6359
DNA (711bp) protein (237aa)
Putative serine/threonine protein kinase (RIOK1) {ECO:0000313|EMBL:AIF00782.1}; EC=2.7.11.1 {ECO:0000313|EMBL:AIF00782.1};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" sour
serine/threonine protein kinase; K07178 RIO kinase 1 [EC:2.7.11.1] id=5041912 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_02_scaffold_11062_8
unknown

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6516..7400
DNA (885bp) protein (295aa)

This feature has no annotations

rifcsphigho2_02_scaffold_11062_9
AR17, Woesearchaeaota, DPANN, Archaea

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7746..8843
DNA (1098bp) protein (366aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036E1529
RNA-directed DNA polymerase Tax=AR17
RNA-directed DNA polymerase Reverse transcriptase
rifcsphigho2_02_scaffold_11062_10

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comp(9244..10266)
DNA (1023bp) protein (341aa)
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA id=5046762 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
radA; DNA repair and recombination protein RadA
rifcsphigho2_02_scaffold_11062_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(10587..10871)
DNA (285bp) protein (95aa)
id=5046763 Tax=RBG_13_Woesearchaeota_36_6_curated
id=5800291 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_11062_12
CG_Woesearch_02, Woesearchaeota, Archaea

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11353..12105
DNA (753bp) protein (251aa)
segregation and condensation protein B Tax=CG_Woesearch_02
Segregation and condensation protein B id=5800167 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Segregation and condensation protein B
rifcsphigho2_02_scaffold_11062_13
unknown

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12408..12545
DNA (138bp) protein (46aa)

This feature has no annotations

rifcsphigho2_02_scaffold_11062_14
unknown

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comp(13192..14028)
DNA (837bp) protein (279aa)

This feature has no annotations

Displaying 14 items

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