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rifcsphigho2_02_scaffold_2244_15

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Woesearchaeota_33_21

near complete RP 32 / 55 MC: 2 BSCG 15 / 51 MC: 1 ASCG 37 / 38 MC: 1
Location: 20227..20412

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor Spt4 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 61.0
  • Bit_score: 97
  • Evalue 4.70e-18
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-5 similarity UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 61.0
  • Bit_score: 97
  • Evalue 6.50e-18
DNA-directed RNA polymerase, subunit E similarity KEGG
DB: KEGG
  • Identity: 49.2
  • Coverage: 59.0
  • Bit_score: 71
  • Evalue 1.30e-10

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Taxonomy

Thermoplasmatales archaeon SCGC AB-539-C06 → Thermoplasmatales → Thermoplasmata → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 186
ATGGCAAGAAAAGTATGCAAAAGATGTAAAATATTTGTAGACGGAACAGAATGCCCTTTATGCAAAGGCGATGCATTTTCAACAAACTGGCAGGGAAGATTATTTATTGGAGATGTTAACAAGTCACTTGTCGCAAAACAAATAGGTGTTACTGCCAAAGGCGAATATGCAATCAAAGTAAGATAA
PROTEIN sequence
Length: 62
MARKVCKRCKIFVDGTECPLCKGDAFSTNWQGRLFIGDVNKSLVAKQIGVTAKGEYAIKVR*