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rifcsphigho2_02_scaffold_2244

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2244_1

Not on your lists

280..2994
DNA (2715bp) protein (905aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003805FB0
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
mutS; DNA mismatch repair protein MutS
rifcsphigho2_02_scaffold_2244_2
Lactococcus piscium, Lactococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3109..4044
DNA (936bp) protein (312aa)
N(5)-(carboxyethyl)ornithine synthase (EC:1.5.1.24)
Alanine dehydrogenase/pyridine nucleotide transhydrogenase n=1 Tax=Acinetobacter radioresistens SK82 RepID=C6RRL3_ACIRA
N(5)-(Carboxyethyl)ornithine synthase ceo {ECO:0000313|EMBL:CEN28970.1}; TaxID=297352 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Lactococcus.;" source="Lactococcus pisc
rifcsphigho2_02_scaffold_2244_3
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

4157..4801
DNA (645bp) protein (215aa)
Multiple antibiotic resistance (MarC)-related protein n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8AMC1_METOI
multiple antibiotic resistance (MarC)-like protein
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=647113 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanococcaceae; Methanothermococcus.;" source="Methanothermococ
rifcsphigho2_02_scaffold_2244_4
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(5048..5668)
DNA (621bp) protein (207aa)
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein id=5049606 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_02_scaffold_2244_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

5794..6009
DNA (216bp) protein (72aa)
id=4744551 Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_2244_6
unknown

Not on your lists

comp(6066..6827)
DNA (762bp) protein (254aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2244_7
unknown

Not on your lists

comp(6915..7046)
DNA (132bp) protein (44aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2244_8
Plasmodium yoelii, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

7427..10027
DNA (2601bp) protein (867aa)
YIR protein {ECO:0000313|EMBL:CDU16364.1}; TaxID=5861 species="Eukaryota; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Vinckeia).;" source="Plasmodium yoel
rifcsphigho2_02_scaffold_2244_9
unknown

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10020..14195
DNA (4176bp) protein (1392aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2244_10
unknown

Not on your lists

14209..15777
DNA (1569bp) protein (523aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2244_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15934..17169
DNA (1236bp) protein (412aa)
NhaP-type Na+(K+)/H+ antiporter n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WKE2_9EURY
cvrA, nhaP2, ycgO; potassium/proton antiporter; K11105 cell volume regulation protein A Tax=CG_Woesearch_02
potassium transporter CPA
rifcsphigho2_02_scaffold_2244_12
Mucor ambiguus, Mucor, Mucorales, Fungi

Not on your lists

comp(17524..18816)
DNA (1293bp) protein (431aa)
Chaperone protein DnaJ n=1 Tax=Prevotella sp. CAG:873 RepID=R7IZN3_9BACT
DNA, scaffold: scf_mam1_v10126, strain NBRC 6742, whole genome shotgun sequence {ECO:0000313|EMBL:GAN06523.1}; TaxID=91626 species="Eukaryota; Fungi; Fungi incertae sedis; Early diverging fungal linea
dnaJ; ankyrin repeat-containing protein
rifcsphigho2_02_scaffold_2244_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

18939..19391
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FD838
hypothetical protein; K07158 Tax=RBG_13_Woesearchaeota_36_6_curated
hypothetical protein
rifcsphigho2_02_scaffold_2244_14
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


19522..20142
DNA (621bp) protein (207aa)
DNA-directed RNA polymerase subunit E n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VV26_9EURY
DNA-directed RNA polymerase subunit E {ECO:0000313|EMBL:ENO11844.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-
DNA-directed RNA polymerase subunit E
rifcsphigho2_02_scaffold_2244_15
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

20227..20412
DNA (186bp) protein (62aa)
Transcription elongation factor Spt4 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VNL3_9EURY
Transcription elongation factor Spt4 {ECO:0000256|HAMAP-Rule:MF_00949}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-5
DNA-directed RNA polymerase, subunit E
rifcsphigho2_02_scaffold_2244_16
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

20580..20906
DNA (327bp) protein (109aa)
30S ribosomal protein S24e n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WJW2_9EURY
30S ribosomal protein S24e {ECO:0000256|HAMAP-Rule:MF_00545}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
RPS24A; ribosomal protein S24E
rifcsphigho2_02_scaffold_2244_17
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

21019..21204
DNA (186bp) protein (62aa)
30S ribosomal protein S27ae n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WLF6_9EURY
30S ribosomal protein S27ae {ECO:0000256|HAMAP-Rule:MF_00777}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
30S ribosomal protein S27a
rifcsphigho2_02_scaffold_2244_18
unknown

Not on your lists

21564..23057
DNA (1494bp) protein (498aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2244_19
R_RIF_OP11_02_39_21, RIF-OP11-2, Microgenomates, Bacteria

Not on your lists

comp(23124..23822)
DNA (699bp) protein (233aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_RIF_OP11_02_39_21_curated
HAD superfamily hydrolase; K07025 putative hydrolase of the HAD superfamily id=5102550 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
rifcsphigho2_02_scaffold_2244_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(23826..24917)
DNA (1092bp) protein (364aa)
phosphoserine phosphatase serb (EC:3.1.3.3); K01079 phosphoserine phosphatase [EC:3.1.3.3] Tax=CG_Woesearch_02
hypothetical protein id=5047527 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_2244_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(25083..25382)
DNA (300bp) protein (100aa)
50S ribosomal protein L12 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WM01_9EURY
50S ribosomal protein L12P Tax=AR11
50S ribosomal protein L12
rifcsphigho2_02_scaffold_2244_22
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists


comp(25672..26568)
DNA (897bp) protein (299aa)
50S ribosomal protein L10 n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VVQ4_9EURY
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Therm
rplP0; 50S ribosomal protein L10
rifcsphigho2_02_scaffold_2244_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(26570..27217)
DNA (648bp) protein (216aa)
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=CG_Woesearch_02
rpl1P; 50S ribosomal protein L1P; K02863 large subunit ribosomal protein L1 id=5047524 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L1
rifcsphigho2_02_scaffold_2244_24
unknown

Not on your lists

27413..28270
DNA (858bp) protein (286aa)

This feature has no annotations

Displaying 24 items

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