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rifcsphigho2_02_scaffold_3000

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_3000_1
CG_Aenigma_01, Aenigmaarchaeota, Archaea

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1..735
DNA (735bp) protein (245aa)
Prophage antirepressor n=1 Tax=uncultured bacterium FPPS_57A9 RepID=S4W7K3_9BACT
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
rifcsphigho2_02_scaffold_3000_2
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

732..1238
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035ECC8C
GntR family transcriptional regulator Tax=GWA1_OD1_36_12
rifcsphigho2_02_scaffold_3000_3
unknown

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1240..1368
DNA (129bp) protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3000_4
unknown

Not on your lists

1377..1529
DNA (153bp) protein (51aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3000_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1640..3400
DNA (1761bp) protein (587aa)
threonyl-tRNA synthetase (EC:6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] Tax=CG_Woesearch_02
Ser-tRNA(Thr) hydrolase; threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3] id=5092949 bin=PER_GWE2_39_6 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
threonyl-tRNA synthetase (EC:6.1.1.3)
rifcsphigho2_02_scaffold_3000_6
unknown

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3495..5819
DNA (2325bp) protein (775aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3000_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


6113..7459
DNA (1347bp) protein (449aa)
signal recognition particle Tax=CG_Woesearch_02
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 id=5050706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
SRP54-type protein, GTPase protein
rifcsphigho2_02_scaffold_3000_8
unknown

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comp(7464..8069)
DNA (606bp) protein (202aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3000_9
Methanococcoides methylutens, Methanococcoides, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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8138..9136
DNA (999bp) protein (333aa)
Putative uncharacterized protein n=1 Tax=Methanococcoides burtonii (strain DSM 6242 / NBRC 107633 / OCM 468 / ACE-M) RepID=Q12TG2_METBU
Permease {ECO:0000313|EMBL:KGK99492.1}; TaxID=2226 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanococcoides.;" source="Methanococcoides methylutens.;"
hypothetical protein
rifcsphigho2_02_scaffold_3000_10

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9419..10108
DNA (690bp) protein (230aa)
uncharacterized LOC100255898 id=5046623 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO45691.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_02_scaffold_3000_11
unknown

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10116..10619
DNA (504bp) protein (168aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3000_12
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

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comp(10600..10782)
DNA (183bp) protein (61aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS24571.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
rifcsphigho2_02_scaffold_3000_13
GWC2_OD1_41_8, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(11083..12762)
DNA (1680bp) protein (560aa)
gltX; glutamyl-tRNA ligase (EC:6.1.1.17)
Glutamate-tRNA ligase {ECO:0000313|EMBL:KKS24572.1}; TaxID=1618755 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWC2_41_8.;"
Glutamate--tRNA ligase id=5800680 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_3000_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13383..13598
DNA (216bp) protein (72aa)
Transcription factor CBF/NF-Y/histone domain-containing protein id=2175381 bin=GWA2_Bacteroidetes_42_15 species=nanoarchaeote Nst1 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Nanoarchaeota tax=GWA2_Bacteroidetes_42_15 organism_group=Bacteroidetes
archaeal histone Tax=CG_Woesearch_02
Archaeal histone
rifcsphigho2_02_scaffold_3000_15
RIFOXYC2_FULL_Peregrinibacteria_41_22_curated, Peregrinibacteria, Bacteria

Not on your lists

13607..13882
DNA (276bp) protein (92aa)
hypothetical protein id=73687 bin=ACD51 species=ACD51 genus=ACD51 taxon_order=ACD51 taxon_class=ACD51 phylum=PER tax=ACD51 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein Tax=RIFOXYC2_FULL_Peregrinibacteria_41_22_curated
hypothetical protein
rifcsphigho2_02_scaffold_3000_16
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

Not on your lists

comp(14498..15418)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LL48_THEBM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADT84955.1}; TaxID=391623 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus barophilus (stra
rifcsphigho2_02_scaffold_3000_17

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comp(15415..16044)
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KMG1_ARCVS
Uncharacterized protein {ECO:0000313|EMBL:KKK97322.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsphigho2_02_scaffold_3000_18
PER_GWF2_39_17, Peregrinibacteria, Bacteria

Not on your lists

16194..17375
DNA (1182bp) protein (394aa)
feoB; bifunctional ferrous iron transporter, protein b/GTP-binding protein/membrane protein; K04759 ferrous iron transport protein B id=5093743 bin=PER_GWE2_39_6 species=PER_GWE2_38_7 genus=PER_GWE2_38_7 taxon_order=PER_GWE2_38_7 taxon_class=PER_GWE2_38_7 phylum=PER tax=PER_GWE2_39_6 organism_group=PER (Peregrinibacteria)
feoB; bifunctional ferrous iron transporter, protein b/GTP-binding protein/membrane protein; K04759 ferrous iron transport protein B Tax=PER_GWF2_39_17
ferrous iron transporter B
rifcsphigho2_02_scaffold_3000_19

Not on your lists

17409..18209
DNA (801bp) protein (267aa)
Calcineurin-like phosphoesterase n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LW95_SYNAS
Calcineurin-like protein phosphoesterase {ECO:0000313|EMBL:KHO49570.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
calcineurin-like phosphoesterase
rifcsphigho2_02_scaffold_3000_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

18211..18621
DNA (411bp) protein (137aa)
Histidine triad (HIT) protein n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4THN6_CALNY id=5103048 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
histidine triad (HIT) protein; K02503 Hit-like protein involved in cell-cycle regulation Tax=AR11
Histidine triad (HIT) protein
rifcsphigho2_02_scaffold_3000_trna_1
unknown

Not on your lists

18858..18980
DNA (123bp)
transferRNA
rifcsphigho2_02_scaffold_3000_21
unknown

Not on your lists

comp(18985..19254)
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3000_22
RBG_13_OP11_Gottesmanbacteria_45_10_curated, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(19854..20831)
DNA (978bp) protein (326aa)
beta-lactamase; K01467 beta-lactamase [EC:3.5.2.6] Tax=RBG_13_OP11_Gottesmanbacteria_45_10_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D8Y9_9BACT
hypothetical protein
rifcsphigho2_02_scaffold_3000_23
unknown

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comp(21128..21400)
DNA (273bp) protein (91aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3000_24
unknown

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21633..21761
DNA (129bp) protein (43aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3000_25
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

21808..22281
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LG49_HALWC
hypothetical protein Tax=CG_Pacearch_05
hypothetical protein
rifcsphigho2_02_scaffold_3000_26
unknown

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22326..22499
DNA (174bp) protein (58aa)

This feature has no annotations

rifcsphigho2_02_scaffold_3000_27
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

22675..23277
DNA (603bp) protein (201aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_3000_28
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

23258..23950
DNA (693bp) protein (231aa)
protein of unknown function (DUF1814)
Marine sediment metagenome DNA, contig: S01H1_L00161 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_3000_29
unknown

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24172..24330
DNA (159bp) protein (53aa)

This feature has no annotations

Displaying 30 items

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