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rifcsphigho2_02_scaffold_1628

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1628_1
unknown

Not on your lists

comp(1..696)
DNA (696bp) protein (232aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1628_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists


comp(999..1469)
DNA (471bp) protein (157aa)
50S ribosomal protein L17, large subunit ribosomal protein L11
rpl11p; 50S ribosomal protein L17; K02867 large subunit ribosomal protein L11 id=5241006 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rpl11p; 50S ribosomal protein L17; K02867 large subunit ribosomal protein L11 Tax=AR10
rifcsphigho2_02_scaffold_1628_3

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comp(1488..1928)
DNA (441bp) protein (147aa)
transcriptional antiterminator NusG
NusG antitermination factor; K02601 transcriptional antiterminator NusG id=5241007 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Transcription elongation factor Spt5 {ECO:0000256|HAMAP-Rule:MF_00950}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1628_4

Not on your lists

comp(1966..2190)
DNA (225bp) protein (75aa)
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; Protein transport protein Sec61 gamma subunit homolog {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1579379 species="Archaea.;" source="a
rifcsphigho2_02_scaffold_1628_5

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comp(2276..3403)
DNA (1128bp) protein (376aa)
cell division protein FtsZ, cell division protein FtsZ
FtsZ_1; cell division protein FtsZ; K03531 cell division protein FtsZ id=5241009 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Cell division protein FtsZ {ECO:0000256|HAMAP-Rule:MF_00909, ECO:0000256|RuleBase:RU003360}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1628_6

Not on your lists

3564..4589
DNA (1026bp) protein (342aa)
flap endonuclease-1 (EC:3.-.-.-)
Flap structure-specific endonuclease; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5240697 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
rifcsphigho2_02_scaffold_1628_7
unknown

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4596..5201
DNA (606bp) protein (202aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1628_8
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

5198..5803
DNA (606bp) protein (202aa)
Uncharacterized protein (Fragment) id=5799902 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein (Fragment) Tax=AR15
HD domain protein
rifcsphigho2_02_scaffold_1628_9

Not on your lists

5847..6161
DNA (315bp) protein (105aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51380.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rifcsphigho2_02_scaffold_1628_10
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(6130..6546)
DNA (417bp) protein (139aa)
hypothetical protein
PIN domain-like id=5241292 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PIN domain-like Tax=AR10
rifcsphigho2_02_scaffold_1628_11
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(6624..7268)
DNA (645bp) protein (215aa)
protein-L-isoaspartate(D-aspartate) O-methyltransferase (EC:2.1.1.77)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] id=5240700 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=AR10
rifcsphigho2_02_scaffold_1628_12

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comp(7290..8210)
DNA (921bp) protein (307aa)
hypothetical protein
hypothetical protein; K07728 putative transcriptional regulator id=5240701 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Putative HTH-type transcriptional regulatory protein QT03_C0001G0187 {ECO:0000256|HAMAP-Rule:MF_00584}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1628_13

Not on your lists

comp(8210..9049)
DNA (840bp) protein (280aa)
4-hydroxybenzoate octaprenyltransferase (EC:2.5.1.-)
prenyltransferase UbiA; K03179 4-hydroxybenzoate octaprenyltransferase [EC:2.5.1.-] id=5240702 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
4-hydroxybenzoate octaprenyltransferase {ECO:0000313|EMBL:AJF59695.1}; EC=2.5.1.- {ECO:0000313|EMBL:AJF59695.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1628_14
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(9114..9287)
DNA (174bp) protein (58aa)
hypothetical protein
id=5240710 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=AR10
rifcsphigho2_02_scaffold_1628_trna_1
unknown

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9433..9507
DNA (75bp)
transferRNA
rifcsphigho2_02_scaffold_1628_15

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9544..10581
DNA (1038bp) protein (346aa)
FIC protein
FICD; FIC domain containing id=5240973 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
FIC protein {ECO:0000313|EMBL:AJF59964.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1628_16
unknown

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10812..11222
DNA (411bp) protein (137aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1628_17
unknown

Not on your lists

comp(11219..11500)
DNA (282bp) protein (94aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1628_18

Not on your lists

11573..12268
DNA (696bp) protein (232aa)
Endonuclease III related protein {ECO:0000313|EMBL:KHO55623.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
HhH-GPD family protein id=5800764 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
HhH-GPD family protein
rifcsphigho2_02_scaffold_1628_19

Not on your lists


12313..14076
DNA (1764bp) protein (588aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=5240563 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:AJF59556.1}; EC=6.1.1.12 {ECO:0000313|EMBL:AJF59556.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1628_20
unknown

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comp(14081..14284)
DNA (204bp) protein (68aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1628_21
unknown

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comp(14309..14500)
DNA (192bp) protein (64aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1628_22

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14545..14889
DNA (345bp) protein (115aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
gatC; aspartyl/glutamyl-tRNA amidotransferase subunit C; K02435 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C [EC:6.3.5.6 6.3.5.7] id=5240564 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1628_23

Not on your lists

14886..16313
DNA (1428bp) protein (476aa)
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
glutamyl-tRNA(Gln) amidotransferase, A subunit; K02433 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7] id=5240565 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KHO55627.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KHO55627.1};; Flags: Fragment;; TaxID=1579379 species="Archaea.;" source="
rifcsphigho2_02_scaffold_1628_24
Desulfatibacillum alkenivorans, Desulfatibacillum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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16396..17145
DNA (750bp) protein (250aa)
Beta-lactamase domain protein n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FLH7_DESAA
beta-lactamase domain-containing protein
Beta-lactamase domain protein {ECO:0000313|EMBL:ACL05123.1}; TaxID=439235 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatibacillum.;" source="De
rifcsphigho2_02_scaffold_1628_25
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

17181..18554
DNA (1374bp) protein (458aa)
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B (EC:6.3.5.6)
glutamyl-tRNA(Gln) amidotransferase subunit beta; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] Tax=AR10
glutamyl-tRNA(Gln) amidotransferase subunit beta; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5240567 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1628_26
Caldisericum exile, Caldisericum, Caldisericales, Caldisericia, Caldiserica, Bacteria

Not on your lists

18563..18955
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GKS6_CALEA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL81363.1}; TaxID=511051 species="Bacteria; Caldiserica; Caldisericia; Caldisericales; Caldisericaceae; Caldisericum.;" source="Caldisericum exile (strain DS
rifcsphigho2_02_scaffold_1628_27
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

19173..19478
DNA (306bp) protein (102aa)
hypothetical protein
hypothetical protein id=5240569 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
hypothetical protein Tax=AR10
rifcsphigho2_02_scaffold_1628_28
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

19487..20029
DNA (543bp) protein (181aa)
ArsR family transcriptional regulator
ArsR family transcriptional regulator id=5240570 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ArsR family transcriptional regulator Tax=AR10
rifcsphigho2_02_scaffold_1628_29
unknown

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comp(20035..20334)
DNA (300bp) protein (100aa)

This feature has no annotations

Displaying items 1-30 of 45 in total

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