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rifcsphigho2_02_scaffold_1736

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_1736_1
CG_Micra_02, Micraarchaeota, Archaea

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2..1843
DNA (1842bp) protein (614aa)
hypothetical protein Tax=CG_Micra_02
rifcsphigho2_02_scaffold_1736_2
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

comp(1856..2521)
DNA (666bp) protein (222aa)
bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157 2.7.7.23)
glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] id=5241751 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157); K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=AR10
rifcsphigho2_02_scaffold_1736_3
unknown

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comp(2576..3418)
DNA (843bp) protein (281aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1736_4

Not on your lists

comp(3435..4337)
DNA (903bp) protein (301aa)
ribonuclease Z (EC:3.1.26.11)
ribonuclease Z; K00784 ribonuclease Z [EC:3.1.26.11] id=5241752 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_0181
rifcsphigho2_02_scaffold_1736_5
unknown

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4424..4795
DNA (372bp) protein (124aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1736_6
unknown

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comp(4823..5776)
DNA (954bp) protein (318aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1736_7

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5955..6977
DNA (1023bp) protein (341aa)
Lon-like protein ATP-dependent protease (EC:3.4.21.-)
ATP-dependent protease La; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5241757 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Lon-like protein ATP-dependent protease {ECO:0000313|EMBL:AJF60748.1}; EC=3.4.21.- {ECO:0000313|EMBL:AJF60748.1};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1736_8
Pyrococcus furiosus, Pyrococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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7142..8224
DNA (1083bp) protein (361aa)
ATP-dependent protease LA n=2 Tax=Pyrococcus furiosus RepID=I6UNC2_9EURY
ATP-dependent protease LA
ATP-dependent protease LA (Lon) {ECO:0000313|EMBL:AAL80591.1}; TaxID=186497 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus furiosus (st
rifcsphigho2_02_scaffold_1736_9
unknown

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comp(8225..8848)
DNA (624bp) protein (208aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1736_10
AR10, Diapherotrites, DPANN, Archaea

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8962..10386
DNA (1425bp) protein (475aa)
Lon-like protein ATP-dependent protease (EC:3.4.21.-)
ATP-dependent protease La; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] id=5241757 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
ATP-dependent protease La; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] Tax=AR10
rifcsphigho2_02_scaffold_1736_11

Not on your lists

comp(10403..11635)
DNA (1233bp) protein (411aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF60749.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
hypothetical protein; K08975 putative membrane protein id=5241758 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1736_12
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

11835..12788
DNA (954bp) protein (318aa)
hypothetical protein
Mechanosensory protein, putative id=5241759 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Mechanosensory protein, putative Tax=AR10
rifcsphigho2_02_scaffold_1736_13
unknown

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12872..12979
DNA (108bp) protein (36aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1736_14
unknown

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comp(12980..13468)
DNA (489bp) protein (163aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1736_15
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

13536..13871
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTE4_METCG id=5103719 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Aenigma_01
hypothetical protein
rifcsphigho2_02_scaffold_1736_16

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comp(13881..14762)
DNA (882bp) protein (294aa)
hypothetical protein
Uncharacterized membrane protein id=5241760 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60751.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1736_17
Methanocella conradii, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

14899..15462
DNA (564bp) protein (188aa)
Putative RNA-binding protein n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I9N2_METCZ
RNA-binding protein
Exosome complex component Csl4 {ECO:0000256|HAMAP-Rule:MF_00975}; TaxID=1041930 species="Archaea; Euryarchaeota; Methanomicrobia; Methanocellales; Methanocellaceae; Methanocella.;" source="Methanocell
rifcsphigho2_02_scaffold_1736_18

Not on your lists

15483..15758
DNA (276bp) protein (92aa)
DNA-directed RNA polymerase subunit L; K03056 DNA-directed RNA polymerase subunit L [EC:2.7.7.6] id=5241762 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L {ECO:0000256|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00261};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1736_19
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15784..16344
DNA (561bp) protein (187aa)
UPF0215 protein Mfer_1016 n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW46_METFV
hypothetical protein; K09120 hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_02_scaffold_1736_20
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

16417..17175
DNA (759bp) protein (253aa)
signal peptidase, endoplasmic reticulum-type (EC:3.4.-.-)
signal peptidase subunit; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] id=5241763 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
signal peptidase subunit; K13280 signal peptidase, endoplasmic reticulum-type [EC:3.4.-.-] Tax=AR10
rifcsphigho2_02_scaffold_1736_21
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

17242..17889
DNA (648bp) protein (216aa)
hypothetical protein
hypothetical protein Tax=CG_Micra_05
hypothetical protein id=5241862 bin=GW2011_AR10_complete species=Candidatus Korarchaeum cryptofilum genus=Candidatus Korarchaeum taxon_order=unknown taxon_class=unknown phylum=Korarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_1736_22

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17886..18461
DNA (576bp) protein (192aa)
hypothetical protein
Putative uncharacterized protein id=5241861 bin=GW2011_AR10_complete species=Candidatus Parvarchaeum acidiphilum genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60852.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_1736_23
CG_Micra_01, Micraarchaeota, Archaea

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18546..18770
DNA (225bp) protein (75aa)
Tax=CG_Micra_01
rifcsphigho2_02_scaffold_1736_24

Not on your lists

18860..19606
DNA (747bp) protein (249aa)
proliferating cell nuclear antigen
proliferating-cell nuclear antigen Pol30; K04802 proliferating cell nuclear antigen id=5241764 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1579370 species="Arch
rifcsphigho2_02_scaffold_1736_25
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19666..21195)
DNA (1530bp) protein (510aa)
cobalamin B12-binding domain-containing protein Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_38_15_curated
radical SAM domain-containing protein id=18248628 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
Fe-S oxidoreductase
rifcsphigho2_02_scaffold_1736_26

Not on your lists

21313..22038
DNA (726bp) protein (242aa)
proliferating cell nuclear antigen
proliferating cell nuclear antigen PcnA; K04802 proliferating cell nuclear antigen id=5241766 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA polymerase sliding clamp {ECO:0000256|HAMAP-Rule:MF_00317, ECO:0000256|RuleBase:RU003673}; Proliferating cell nuclear antigen homolog {ECO:0000256|HAMAP-Rule:MF_00317}; TaxID=1579370 species="Arch
rifcsphigho2_02_scaffold_1736_27
Sulfolobus tokodaii, Sulfolobus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(22082..22474)
DNA (393bp) protein (131aa)
Putative ribonuclease n=2 Tax=Sulfolobus tokodaii RepID=F9VNP7_SULTO
virulence-associated protein
Putative ribonuclease {ECO:0000313|EMBL:BAK54693.1}; TaxID=273063 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Sulfolobus.;" source="Sulfolobus tokodaii (strain DSM 1699
rifcsphigho2_02_scaffold_1736_28
unknown

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comp(22476..22757)
DNA (282bp) protein (94aa)

This feature has no annotations

rifcsphigho2_02_scaffold_1736_29
AR10, Diapherotrites, DPANN, Archaea

Not on your lists

22954..23982
DNA (1029bp) protein (343aa)
priL; DNA primase large subunit (EC:2.7.7.-)
priL; DNA primase, large subunit (EC:2.7.7.-); K02685 DNA primase large subunit [EC:2.7.7.-] id=5241767 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
priL; DNA primase, large subunit (EC:2.7.7.-); K02685 DNA primase large subunit [EC:2.7.7.-] Tax=AR10
rifcsphigho2_02_scaffold_1736_30

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23979..25199
DNA (1221bp) protein (407aa)
putative DNA primase, small subunit; K02683 DNA primase [EC:2.7.7.-] id=5241769 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA primase small subunit PriS {ECO:0000256|HAMAP-Rule:MF_00700}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00700, ECO:0000256|RuleBase:RU003514};; TaxID=1579370 species="Archaea.;" source="archaeon GW201
hypothetical protein
Displaying items 1-30 of 37 in total

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