ggKbase home page

rifcsphigho2_02_scaffold_5936_5

Organism: RIFCSPHIGHO2_02_FULL_Archaea_Diapherotrites_AR10_42_12

near complete RP 32 / 55 MC: 3 BSCG 22 / 51 ASCG 33 / 38 MC: 1
Location: 8138..10762

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.7
  • Coverage: 863.0
  • Bit_score: 1198
  • Evalue 0.0
DNA-directed RNA polymerase subunit A'; K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5241336 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10 similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 874.0
  • Bit_score: 1186
  • Evalue 0.0
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 66.5
  • Coverage: 874.0
  • Bit_score: 1186
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR21 → Archaea

Sequences

DNA sequence
Length: 2625
ATGCTGGTTAAAAAAATTTCTTCGATTCAGTTCAGGGTTTTAAGCCCTGCAATGATAAGAAAAATGTCCGCGCTAGAAATAAAGACTCCTGAGACATACGACAAGGACGGATATCCGATGGAAGGCGGGTTAATGGACCAGCATCTCGGAGTAATAAACCCGGGATTGAGATGCAAAACATGCGGGCAGAAAATGAAGCAGTGCCCGGGGCATTTTGGAAGCTTAGAGCTTGTAAGGCCTGTAATGCATTCAGAATTCAGCAGGCGCGTTGAACAGTTGATGCACGCAACATGCAAGGAATGCGGAAGAATAGCACTGCCGGATGAAAAACTTGAAACCGCGAGAAAAAACCTTACTCCTGAAAACGGCGAGATAATAGGAAAAAAAATTGCGGCAAAGGCAAGGAAAATAAGAAAATGCCCACACTGCAAGGCGGAAAAAGGAACTGTTCTGCTTGACAAGCCGACAAACTTTTTTTACAACAAGGAAAGAATTTATCCAACACAAATAAGGGAATGGATGGAAAAAATTCCCGATAAGGACTTGGAATTATTCGGATACAAACAGGAAATCACAAAGCCGAGCTGGTTCATACTTACTGTTGTTCCGATTCCTCCCGTTACAATTAGGCCGAGCATTACTCTTGAATCAGGTATAAAATCAGAAGACGATTTAACACACAAGCTTGTTGACATTATAAGAATCAATCTGCGCTTAAAGGACAATATTGATGCGGGAGCTCCTCAGCTGATTATTGAGGACTTGTGGGATTTGCTGCAGTACCATGTAACAACTTATTTCGACAACAACACTGCAGGAGTACCGCCCGCAAAGCACAGGAGCGGGCGCGCTTTGCGGACAATTGTCCAGAGGCTGAAGGGAAAAAAAGGAAGATTCAGGCACAATTTAACAGGGAAGAGAGTAAACTTTGCGGCAAGAAGCACAATTACTCCCGACCCGTATATTTTAATCAGCGAAGTCGGAGTTCCTGAGGAAATTGCCGCTGAACTTACTGTTCCGGAAATGGTTACTGAATGGAACAAAAAGGCAATTCTTGAGCTTGTGGAAAAAACAGACAAGGCAGTCTATCTTGTAAGGCCGAACGAAACAAGAAAAAAAATAGACGAGACAAACAAAAAAGAAGTCCTTGAAGAGATTGACGTCGGCTTTAAAATAGAAAGGCAGTTAATGGACGGCGATGTTGCATTGTTCAACAGGCAGCCTTCATTGCACAGATTGAGCATGCTTGCGCACAAAGTGAGAGTAATGCCGGGCAGGACTTTCAGGATAAATCCCATTGTCTGCAAGCCATACAATGCAGACTTTGACGGGGATGAAATGAATCTTCATGTTCCCCAGACAGAAGAGGGAAAGGCAGAAGCCCTTGAATTAATGTATGTTAGAAACCAGGTAATTTCCCCGAGATACGGAGCGCCTGTGATTGTGCTTGCCGAAGACGGAATAACGGGATTGTTCGCGCTCACTCTCGATTCAACTGAATTTTCAAGGGAAGAGGCAATGAAATATTTTTACGAAATAGGAATCAAGGAACTGCCGAAGCCTGACCGCGGAAAAAAATATTCGGGAAAATTGATTTTCAGCCAGCTGCTTCCAAAAGATCTGAATCTTGAATATAAAACCTTTACATGTAGCATTCTGAAAAAAATCGGAATGTGCGAAGGCTGCACAAAGGACAAATGCGGCTTTGACGCGTATCTTAAAATAACAAACGGAAAGCTTGTTTCAGGCGTAATTGACAAGGAATCCTTGGGAGAAGGAATTGGAAAGCTTGTTGACGCGCTTGCAAGGCACTATCCAAGCGAAGTAATAGAGGAATTTTATGCAAAGGCATCCAGAATAGTGAGCGAACTGCTAACTGCAAAGGGAATGACTGTAGGTCTTGATGAATACCTTGTAAGCGACCACATTGAAAAGGAAAAACAGAAGGCAATAAAGGAAACAATCGAAAAGGCGGAAGAGCTTGTCTCAAAATACAAAAAAGGAAATTTGGAGCACATTGCGGGAAAAAGCATTGAAGAGAGCTTTGAAACATTCATGATGCAGAATGCATCGGAAGGAAAAAGCGCTGTTGAAAAGGAAATTATACGCGAAAAAATGGACACAATACTGGGCAAAAACCCTCAGTTCAACAGCATGGCAATGATACTGAGCGGAAGCAGAGGCGGAAGCACAAACTTAATGAACATTGCGGGATTCTGGGGGCAGGTAGCGGTAAGGTCGGGAAGGCCTCACAGGGGATTTTCTGAAAGAGTAATTACCTTGAACAAAAAAGAGGACGCAGGATTATTCGCGCACGGCTTTATAACTACAAACTTTGTAAAGGGAATGGACGCAAAGGAATACTTCTATCACAGCATGGGCGGAAGGCAGGGAGAAGTAGACACGGGAGTTTCAACAAAGGTTTCGGGATACTTGTACAGAAGGCTTGCAAACAGCCTCAAGGATTTATTGGTTCAGAACGACGGGACAGTGAGAACTGCCTCAAAGAACATTGTCCAGTATGCCTACGGCGAAGACGGAGTTTTCCCGCAGAAAACAGTAAAGGGAAAAACAATCGATGTGGACATGGAATTTGTGAGAATGGAAACAGAAAAAAAAGAATAA
PROTEIN sequence
Length: 875
MLVKKISSIQFRVLSPAMIRKMSALEIKTPETYDKDGYPMEGGLMDQHLGVINPGLRCKTCGQKMKQCPGHFGSLELVRPVMHSEFSRRVEQLMHATCKECGRIALPDEKLETARKNLTPENGEIIGKKIAAKARKIRKCPHCKAEKGTVLLDKPTNFFYNKERIYPTQIREWMEKIPDKDLELFGYKQEITKPSWFILTVVPIPPVTIRPSITLESGIKSEDDLTHKLVDIIRINLRLKDNIDAGAPQLIIEDLWDLLQYHVTTYFDNNTAGVPPAKHRSGRALRTIVQRLKGKKGRFRHNLTGKRVNFAARSTITPDPYILISEVGVPEEIAAELTVPEMVTEWNKKAILELVEKTDKAVYLVRPNETRKKIDETNKKEVLEEIDVGFKIERQLMDGDVALFNRQPSLHRLSMLAHKVRVMPGRTFRINPIVCKPYNADFDGDEMNLHVPQTEEGKAEALELMYVRNQVISPRYGAPVIVLAEDGITGLFALTLDSTEFSREEAMKYFYEIGIKELPKPDRGKKYSGKLIFSQLLPKDLNLEYKTFTCSILKKIGMCEGCTKDKCGFDAYLKITNGKLVSGVIDKESLGEGIGKLVDALARHYPSEVIEEFYAKASRIVSELLTAKGMTVGLDEYLVSDHIEKEKQKAIKETIEKAEELVSKYKKGNLEHIAGKSIEESFETFMMQNASEGKSAVEKEIIREKMDTILGKNPQFNSMAMILSGSRGGSTNLMNIAGFWGQVAVRSGRPHRGFSERVITLNKKEDAGLFAHGFITTNFVKGMDAKEYFYHSMGGRQGEVDTGVSTKVSGYLYRRLANSLKDLLVQNDGTVRTASKNIVQYAYGEDGVFPQKTVKGKTIDVDMEFVRMETEKKE*