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rifcsphigho2_02_scaffold_5936

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_5936_1
unknown

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2..2806
DNA (2805bp) protein (935aa)
hypothetical protein
rifcsphigho2_02_scaffold_5936_2
CG_Woesearch_02, Woesearchaeota, Archaea

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3012..3254
DNA (243bp) protein (81aa)
rpoH; DNA-directed RNA polymerase subunit H (EC:2.7.7.6); K03053 DNA-directed RNA polymerase subunit H [EC:2.7.7.6] Tax=CG_Woesearch_02
DNA-directed RNA polymerase subunit H n=1 Tax=nanoarchaeote Nst1 RepID=R1E493_9ARCH
DNA-directed RNA polymerase subunit H
rifcsphigho2_02_scaffold_5936_3
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

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3283..6267
DNA (2985bp) protein (995aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6) Tax=RBG_16_Euryarchaeota_68_12_curated
DNA-directed RNA polymerase subunit B (EC:2.7.7.6)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5241333 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_5936_4

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6304..8127
DNA (1824bp) protein (608aa)
DNA-directed RNA polymerase subunit B' (EC:2.7.7.6)
DNA-directed RNA polymerase, subunit b' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5241335 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_5936_5

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8138..10762
DNA (2625bp) protein (875aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
DNA-directed RNA polymerase subunit A'; K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5241336 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
rifcsphigho2_02_scaffold_5936_6
AR10, Diapherotrites, DPANN, Archaea

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10784..12109
DNA (1326bp) protein (442aa)
rpoA2; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
rpoA2; DNA-directed RNA polymerase, subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] id=5241337 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rpoA2; DNA-directed RNA polymerase, subunit A'' (EC:2.7.7.6); K03042 DNA-directed RNA polymerase subunit A" [EC:2.7.7.6] Tax=AR10
rifcsphigho2_02_scaffold_5936_7

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12128..12439
DNA (312bp) protein (104aa)
large subunit ribosomal protein L30e
LSU ribosomal protein l30e; K02908 large subunit ribosomal protein L30e id=5241338 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
50S ribosomal protein L30e {ECO:0000256|HAMAP-Rule:MF_00481}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_02_scaffold_5936_8

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12453..12866
DNA (414bp) protein (138aa)
N utilization substance protein A {ECO:0000313|EMBL:KHO55781.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
nusA; N utilization substance protein A
nusA; transcription elongation factor NusA-like protein; K02600 N utilization substance protein A id=5241339 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_5936_9
AR10, Diapherotrites, DPANN, Archaea

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12863..13324
DNA (462bp) protein (154aa)
30S ribosomal protein S12, small subunit ribosomal protein S12
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5241340 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=AR10
rifcsphigho2_02_scaffold_5936_10
AR10, Diapherotrites, DPANN, Archaea

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13345..13959
DNA (615bp) protein (205aa)
small subunit ribosomal protein S7
30S ribosomal protein S5e (S7p); K02992 small subunit ribosomal protein S7 id=5241341 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
30S ribosomal protein S5e (S7p); K02992 small subunit ribosomal protein S7 Tax=AR10
rifcsphigho2_02_scaffold_5936_11
AR10, Diapherotrites, DPANN, Archaea

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14075..16267
DNA (2193bp) protein (731aa)
fusA; elongation factor 2
fusA; elongation factor EF-2; K03234 elongation factor 2 id=5241342 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
fusA; elongation factor EF-2; K03234 elongation factor 2 Tax=AR10
rifcsphigho2_02_scaffold_5936_12
AR19, Pacearchaeaota, DPANN, Archaea

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16349..16612
DNA (264bp) protein (88aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GWI9_9EURY
hypothetical protein Tax=AR19
hypothetical protein
rifcsphigho2_02_scaffold_5936_13

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16613..16957
DNA (345bp) protein (115aa)
hypothetical protein
hypothetical protein id=5241183 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60174.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
Displaying 13 items

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