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rifcsphigho2_02_scaffold_12087

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_12087_1

Not on your lists

259..516
DNA (258bp) protein (86aa)
id=5046763 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45951.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_12087_2
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

587..3109
DNA (2523bp) protein (841aa)
DNA repair and recombination protein RadA n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=RADA_THEKO rbh
Pko radA intein Tax=CG_Micra_02
DNA repair and recombination protein RadA
rifcsphigho2_02_scaffold_12087_3
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

3190..3432
DNA (243bp) protein (81aa)
Tax=CG_Pacearch_03
rifcsphigho2_02_scaffold_12087_4
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

3434..3796
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003705994
PIN domain-containing protein Tax=RBG_13_Woesearchaeota_36_6_curated
PIN protein
rifcsphigho2_02_scaffold_12087_5
unknown

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3919..4440
DNA (522bp) protein (174aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12087_6
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

comp(4698..5579)
DNA (882bp) protein (294aa)
Glycosyl transferase family 2 Tax=GWA2_OD1_40_9
family 2 glycosyl transferase id=5049555 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Glycosyltransferases involved in cell wall biogenesis
rifcsphigho2_02_scaffold_12087_7
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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5811..7235
DNA (1425bp) protein (475aa)
Polysaccharide biosynthesis protein n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BAX7_METIK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKB46569.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
rifcsphigho2_02_scaffold_12087_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7394..9433)
DNA (2040bp) protein (680aa)
hypothetical protein Tax=AR11
id=5045888 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_12087_9
R_WOR_2_48_11, WOR-2, Bacteria

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9601..10317
DNA (717bp) protein (239aa)
Glycosyl transferase family 2 n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RGG6_ARCPA
family 2 glycosyl transferase; K07027 Tax=RIFCSPHIGHO2_02_FULL_WOR_2_48_11_curated
family 2 glycosyl transferase
rifcsphigho2_02_scaffold_12087_10
Methanobacterium formicicum, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10314..11222)
DNA (909bp) protein (303aa)
hypothetical protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-O10 RepID=UPI00037AD7AF
oxidoreductase GFO/IDH/MOCA family/hexapeptide repeat-containing acetyltransferase
Oxidoreductase GFO/IDH/MOCA family/hexapeptide repeat-containing acetyltransferase {ECO:0000313|EMBL:AIS31284.1}; TaxID=2162 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Metha
rifcsphigho2_02_scaffold_12087_11
GWB1_OP11_38_5_partial, Woesebacteria, Microgenomates, Bacteria

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11301..12515
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D8F6_9BACT
Nucleoside-diphosphate-sugar epimerase Tax=GWB1_OP11_38_5_partial
hypothetical protein
rifcsphigho2_02_scaffold_12087_12
R_OP11_Woesebacteria_38_26, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(12508..13599)
DNA (1092bp) protein (364aa)
mag:amb0139 nucleoside-diphosphate-sugar epimerase; K01710 dTDP-glucose 4,6-dehydratase [EC:4.2.1.46] id=71825 bin=ACD50 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=ACD50 organism_group=OP11 (Microgenomates) organism_desc=OP11
putative NAD-dependent epimerase/dehydratase (EC:4.1.1.35)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Woesebacteria_38_26_curated
rifcsphigho2_02_scaffold_12087_13
RLO_Omnitrophica_50_11, Omnitrophica, Bacteria

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comp(13596..13994)
DNA (399bp) protein (133aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Omnitrophica_50_11_curated
Putative uncharacterized protein id=3333226 bin=GWA2_OP3_52_12 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_OP3_52_12 organism_group=OP3 (Omnitrophica) organism_desc=Genome is FULL of scaffolding errors
conserved protein of unknown function[Include Cupin domain ]
rifcsphigho2_02_scaffold_12087_14
unknown

Not on your lists

comp(14108..16336)
DNA (2229bp) protein (743aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12087_15

Not on your lists

16354..17469
DNA (1116bp) protein (372aa)
Nucleoside-diphosphate-sugar epimerase id=5800146 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:AJF61477.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
NAD-dependent epimerase/dehydratase
rifcsphigho2_02_scaffold_12087_16
GWA1_OP11_39_12_plus, Woesebacteria, Microgenomates, Bacteria

Not on your lists

17689..19365
DNA (1677bp) protein (559aa)
Nodulation protein nolO {ECO:0000313|EMBL:KKQ97164.1}; TaxID=1618549 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_39_12.;"
pmh:P9215_04261 carbamoyl transferase id=2649 bin=ACD11 species=ACD11 genus=ACD11 taxon_order=ACD11 taxon_class=ACD11 phylum=OD1-i tax=ACD11 organism_group=OD1-i organism_desc=OD1-i
Carbamoyltransferase family
rifcsphigho2_02_scaffold_12087_17
RHI_OP11_Gottemanbacteria_40_13, Gottesmanbacteria, Microgenomates, Bacteria

Not on your lists

19372..20163
DNA (792bp) protein (264aa)
lipopolysaccharide core biosynthesis glycosyltransferase waaE (EC:2.4.1.226)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1Q1I2_9BACT id=131306 bin=ACD7 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=ACD7 organism_group=OD1-i organism_desc=OD1-i
family 2 glycosyl transferase Tax=RIFCSPHIGHO2_12_FULL_OP11_Gottemanbacteria_40_13_curated
rifcsphigho2_02_scaffold_12087_18
RIFOXYB2_FULL_Elusimicrobia_48_7_curated, Elusimicrobia, Bacteria

Not on your lists

comp(20168..21250)
DNA (1083bp) protein (361aa)
Glycosyl transferase, group 1 n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DQA6_9BACT
glycosyl transferases group 1 family protein
Tax=RIFOXYB2_FULL_Elusimicrobia_48_7_curated
rifcsphigho2_02_scaffold_12087_19

Not on your lists

21512..22585
DNA (1074bp) protein (358aa)
Glycosyl transferase family 2 n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XP15_9BACT
Marine sediment metagenome DNA, contig: S01H1_S06659 {ECO:0000313|EMBL:GAG03548.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
glycosyltransferase
rifcsphigho2_02_scaffold_12087_20

Not on your lists

comp(22582..23061)
DNA (480bp) protein (160aa)
id=5048453 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45487.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_12087_21
RBG_13_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

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comp(23063..24100)
DNA (1038bp) protein (346aa)
Tax=RBG_13_Nitrospirae_43_8_curated
rifcsphigho2_02_scaffold_12087_22
R_OP11_Beckwithbacteria_49_39, Beckwithbacteria, Microgenomates, Bacteria

Not on your lists

comp(24112..24858)
DNA (747bp) protein (249aa)
family 2 glycosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] id=15191564 bin=GWC1_OP11_49_16_COMPLETE species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
family 2 glycosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] Tax=RIFCSPHIGHO2_01_FULL_OP11_Beckwithbacteria_49_39_curated
family 2 glycosyltransferase
rifcsphigho2_02_scaffold_12087_23
unknown

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comp(24978..25544)
DNA (567bp) protein (189aa)

This feature has no annotations

rifcsphigho2_02_scaffold_12087_24
CG_Anaero_01, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(25677..26762)
DNA (1086bp) protein (362aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Calditerrivibrio nitroreducens (strain DSM 19672 / NBRC 101217 / Yu37-1) RepID=E4THC5_CALNY
putative aminotransferase; K13010 perosamine synthetase Tax=CG_Anaero_01
degt/dnrj/eryc1/strs aminotransferase
rifcsphigho2_02_scaffold_12087_25

Not on your lists

27241..28887
DNA (1647bp) protein (549aa)
id=5045926 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46271.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_02_scaffold_12087_26
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

28859..29191
DNA (333bp) protein (111aa)
Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_12087_27
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(29192..29569)
DNA (378bp) protein (126aa)
id=5045928 Tax=CG_Woesearch_01
id=5045928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_12087_28
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(29532..31292)
DNA (1761bp) protein (587aa)
id=5044235 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
rifcsphigho2_02_scaffold_12087_29

Not on your lists

31496..32218
DNA (723bp) protein (241aa)
Dolichyl-phosphate beta-D-mannosyltransferase {ECO:0000313|EMBL:CEG13878.1}; EC=2.4.1.83 {ECO:0000313|EMBL:CEG13878.1};; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenom
Uncharacterized protein n=1 Tax=Pythium ultimum RepID=K3WCE1_PYTUL
glycosyl transferase family protein
rifcsphigho2_02_scaffold_12087_30
Methanobacterium paludis, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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32215..33105
DNA (891bp) protein (297aa)
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:AEG17590.1}; EC=1.1.1.133 {ECO:0000313|EMBL:AEG17590.1};; TaxID=868131 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanob
dTDP-4-dehydrorhamnose reductase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D555_METSW
Displaying items 1-30 of 32 in total

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