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rifcsphigho2_02_scaffold_9836

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_9836_1
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(282..653)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEX1_9ZZZZ id=5103294 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_03
rifcsphigho2_02_scaffold_9836_2
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(889..2175)
DNA (1287bp) protein (429aa)
seg Tax=CG_Woesearch_03
seg id=5800205 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_9836_3
unknown

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comp(2290..2682)
DNA (393bp) protein (131aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9836_4
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(2826..3320)
DNA (495bp) protein (165aa)
Ig family protein Tax=CG_Woesearch_01
rifcsphigho2_02_scaffold_9836_5
unknown

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comp(3313..4413)
DNA (1101bp) protein (367aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9836_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4439..6118)
DNA (1680bp) protein (560aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Muenchen str. baa1594 RepID=V1WTS9_SALMU
Uncharacterized protein {ECO:0000313|EMBL:ETX64476.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
tail fiber protein
rifcsphigho2_02_scaffold_9836_7
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

6290..7417
DNA (1128bp) protein (376aa)
geranylgeranyl reductase Tax=CG_Pacearch_04
Geranylgeranyl reductase id=5800202 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Geranylgeranyl reductase
rifcsphigho2_02_scaffold_9836_8
unknown

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7541..7774
DNA (234bp) protein (78aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9836_9
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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7798..11142
DNA (3345bp) protein (1115aa)
oligosaccharyl transferase STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] Tax=RBG_13_Woesearchaeota_36_6_curated
oligosaccharyl transferase, STT3 subunit; K07151 dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119] id=5045945 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
oligosaccharyl transferase STT3 subunit
rifcsphigho2_02_scaffold_9836_10
CG_Woesearch_02, Woesearchaeota, Archaea

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11147..11803
DNA (657bp) protein (219aa)
glycosyl transferase Tax=CG_Woesearch_02
family 2 glycosyl transferase id=5045944 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
glycosyl transferase family protein 16
rifcsphigho2_02_scaffold_9836_11
unknown

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11843..12346
DNA (504bp) protein (168aa)

This feature has no annotations

rifcsphigho2_02_scaffold_9836_12

Not on your lists

12357..12701
DNA (345bp) protein (115aa)
hypothetical protein; K09153 hypothetical protein id=5045943 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46288.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_02_scaffold_9836_13
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

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12800..13996
DNA (1197bp) protein (399aa)
group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Glycosyl transferase group 1 id=3643107 bin=GWC2_Deltaproteobacteria_42_51 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
group 1 glycosyl transferase
rifcsphigho2_02_scaffold_9836_14
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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13998..14609
DNA (612bp) protein (204aa)
gpmB; fructose-2,6-bisphosphatase; phosphoglyceromutase,type 2 (EC:3.1.3.46 5.4.2.1)
CobC/GpmA family phosphatase {ECO:0000313|EMBL:CAJ53608.1}; EC=3.1.3.- {ECO:0000313|EMBL:CAJ53608.1};; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloqu
Probable adenosylcobalamin 5'-phosphate phosphatase / alpha-ribazole 5'-phosphate phosphatase n=1 Tax=Haloquadratum walsbyi (strain DSM 16790 / HBSQ001) RepID=Q18EL5_HALWD
rifcsphigho2_02_scaffold_9836_15
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(14638..15420)
DNA (783bp) protein (261aa)
Glycerophosphodiester phosphodiesterase n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6D9Y3_9FIRM
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:CDA81809.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
glycerophosphoryl diester phosphodiesterase
rifcsphigho2_02_scaffold_9836_16
R_RIF_OD1_07_45_25, RIF-OD1-7, Parcubacteria, Bacteria

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comp(15453..15941)
DNA (489bp) protein (163aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_07_45_25_curated
Displaying 16 items

View Taxonomy