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rifcsphigho2_02_scaffold_2660

Search features with annotation key words

Displaying items 1-30 of 45 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_2660_1
unknown

Not on your lists

2..112
DNA (111bp) protein (37aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2660_2
unknown

Not on your lists

171..773
DNA (603bp) protein (201aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2660_3
unknown

Not on your lists

770..1366
DNA (597bp) protein (199aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2660_4
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1363..1713)
DNA (351bp) protein (117aa)
hypothetical protein
id=5103013 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_02_scaffold_2660_5
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists

comp(1710..2090)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0ML39_9BACT
hypothetical protein; K06934 Tax=RBG_13_RIF_OD1_08_41_18_curated
hypothetical protein
rifcsphigho2_02_scaffold_2660_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2200..2781
DNA (582bp) protein (194aa)
hypothetical protein Tax=AR11
hypothetical protein id=5048442 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_02_scaffold_2660_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

2984..4651
DNA (1668bp) protein (556aa)
pyrG; CTP synthetase (EC:6.3.4.2); K01937 CTP synthase [EC:6.3.4.2] Tax=RBG_13_Woesearchaeota_36_6_curated
CTP synthase (EC:6.3.4.2)
CTP synthase n=1 Tax=delta proteobacterium NaphS2 RepID=D8FDF8_9DELT
rifcsphigho2_02_scaffold_2660_8
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

4685..5806
DNA (1122bp) protein (374aa)
preprotein translocase subunit SecF Tax=CG_Woesearch_01
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5048448 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Protein-export membrane protein SecF
rifcsphigho2_02_scaffold_2660_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

5796..7424
DNA (1629bp) protein (543aa)
secd/secf/secdf export membrane protein; K03072 preprotein translocase subunit SecD Tax=CG_Woesearch_02
hypothetical protein; K03072 preprotein translocase subunit SecD id=5047439 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SecD/SecF/SecDF export membrane protein
rifcsphigho2_02_scaffold_2660_10
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7579..8121)
DNA (543bp) protein (181aa)
hypothetical protein
id=5051036 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_02_scaffold_2660_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(8124..8765)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037235B6
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_02_scaffold_2660_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

8942..9478
DNA (537bp) protein (179aa)
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] Tax=CG_Woesearch_02
cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14] id=5046594 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
cytidylate kinase (EC:2.7.4.14)
rifcsphigho2_02_scaffold_2660_13

Not on your lists

9720..10412
DNA (693bp) protein (231aa)
peptidyl-prolyl cis-trans isomerase; K03775 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD [EC:5.2.1.8] id=5043665 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Marine sediment metagenome DNA, contig: S01H1_S32338 {ECO:0000313|EMBL:GAG36499.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Peptidyl-prolyl cis-trans isomerase
rifcsphigho2_02_scaffold_2660_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

10463..11563
DNA (1101bp) protein (367aa)
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=CG_Woesearch_02
Cell division protein FtsZ id=5800713 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cell division protein FtsZ
rifcsphigho2_02_scaffold_2660_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


12096..12584
DNA (489bp) protein (163aa)
LSU ribosomal protein L24A (Rpl24A) n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O29713_ARCFU id=5103029 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
transcription antitermination protein NusG; K02601 transcriptional antiterminator NusG Tax=CG_Woesearch_02
LSU ribosomal protein L24A Rpl24A
rifcsphigho2_02_scaffold_2660_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


12587..13354
DNA (768bp) protein (256aa)
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=CG_Woesearch_02
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 id=5043660 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
LSU ribosomal protein L11P
rifcsphigho2_02_scaffold_2660_17
Candidatus Acidianus copahuensis, Acidianus, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

comp(13419..13616)
DNA (198bp) protein (66aa)
30S ribosomal protein S17e {ECO:0000256|HAMAP-Rule:MF_00511, ECO:0000256|SAAS:SAAS00278999}; TaxID=1160895 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Acidianus.;" sour
ribosomal protein S17e Rps17e; K02962 small subunit ribosomal protein S17e id=5043656 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S17e
rifcsphigho2_02_scaffold_2660_18
unknown

Not on your lists

13716..13874
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2660_trna_1
unknown

Not on your lists

13923..13994
DNA (72bp)
transferRNA
rifcsphigho2_02_scaffold_2660_19
unknown

Not on your lists

comp(14028..14438)
DNA (411bp) protein (137aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2660_20
unknown

Not on your lists

14540..14695
DNA (156bp) protein (52aa)

This feature has no annotations

rifcsphigho2_02_scaffold_2660_trna_2
unknown

Not on your lists

comp(14784..14856)
DNA (73bp)
transferRNA
rifcsphigho2_02_scaffold_2660_21
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15164..15679)
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAJ1_9EURY
hypothetical protein
Putative uncharacterized protein Tax=AR17
rifcsphigho2_02_scaffold_2660_22
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15714..16805)
DNA (1092bp) protein (364aa)
DNA topoisomerase VI subunit A (EC:5.99.1.3); K03166 DNA topoisomerase VI subunit A [EC:5.99.1.3] Tax=AR9
DNA topoisomerase (ATP-hydrolyzing) n=4 Tax=Candidatus Parvarchaeum RepID=D2EGK9_9EURY id=5103234 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA topoisomerase ATP-hydrolyzing
rifcsphigho2_02_scaffold_2660_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16783..18375)
DNA (1593bp) protein (531aa)
top6B; DNA topoisomerase VI subunit B (EC:5.99.1.3); K03167 DNA topoisomerase VI subunit B [EC:5.99.1.3] Tax=CG_Woesearch_02
DNA topoisomerase VI, B subunit id=5800438 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA topoisomerase VI, subunit B
rifcsphigho2_02_scaffold_2660_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(18449..18997)
DNA (549bp) protein (183aa)
KH domain protein; K06961 ribosomal RNA assembly protein Tax=CG_Woesearch_02
KH domain protein; K06961 ribosomal RNA assembly protein id=5048469 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
KH domain protein
rifcsphigho2_02_scaffold_2660_25
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(19173..19499)
DNA (327bp) protein (109aa)
id=5043594 Tax=CG_Woesearch_02
id=5043594 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_02_scaffold_2660_26
Chlorobium phaeobacteroides, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

19621..22257
DNA (2637bp) protein (879aa)
ATPase, P-type (Transporting), HAD superfamily, subfamily IC n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EKY3_CHLPB rbh
P-type HAD superfamily ATPase
ATPase, P-type (Transporting), HAD superfamily, subfamily IC {ECO:0000313|EMBL:ACE03210.1}; TaxID=331678 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon gro
rifcsphigho2_02_scaffold_2660_27
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

22285..23991
DNA (1707bp) protein (569aa)
Histone acetyltransferase Elp3 like protein id=5800668 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Histone acetyltransferase Elp3 like protein Tax=AR15
Histone acetyltransferase Elp3 like protein
rifcsphigho2_02_scaffold_2660_28

Not on your lists

23988..24947
DNA (960bp) protein (320aa)
tRNA (Cytosine-48,49-C(5)-) methyltransferase id=5800672 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
tRNA (Cytosine-48,49-C(5)-) methyltransferase {ECO:0000313|EMBL:AJF62003.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
RNA methylase, NOL1/NOP2/sun family
Displaying items 1-30 of 45 in total

View Taxonomy