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rifcsphigho2_02_scaffold_7708

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_02_scaffold_7708_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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393..536
DNA (144bp) protein (48aa)
Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_02_scaffold_7708_2
unknown

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533..637
DNA (105bp) protein (35aa)

This feature has no annotations

rifcsphigho2_02_scaffold_7708_3

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634..1431
DNA (798bp) protein (266aa)
Marine sediment metagenome DNA, contig: S12H4_S07920 {ECO:0000313|EMBL:GAI97973.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
carbohydrate kinase
carbohydrate kinase id=5240577 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_02_scaffold_7708_4
CG_Woesearch_02, Woesearchaeota, Archaea

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1419..3092
DNA (1674bp) protein (558aa)
sodium/hydrogen exchanger Tax=CG_Woesearch_02
sodium/hydrogen exchanger id=5048682 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transporter, CPA2 family
rifcsphigho2_02_scaffold_7708_5
CG_Woesearch_01, Woesearchaeota, Archaea

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3276..4799
DNA (1524bp) protein (508aa)
Putative uncharacterized protein Tax=CG_Woesearch_01
Putative uncharacterized protein id=5043950 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_02_scaffold_7708_6
CG_Woesearch_02, Woesearchaeota, Archaea

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4850..5452
DNA (603bp) protein (201aa)
Tax=CG_Woesearch_02
rifcsphigho2_02_scaffold_7708_7
CG_Woesearch_01, Woesearchaeota, Archaea

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5449..7470
DNA (2022bp) protein (674aa)
Putative uncharacterized protein Tax=CG_Woesearch_01
Putative uncharacterized protein id=5800820 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_02_scaffold_7708_8

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comp(7474..9108)
DNA (1635bp) protein (545aa)
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5043637 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579365 species="Archaea.;" source=
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
rifcsphigho2_02_scaffold_7708_9
R_OD1_Falkowbacteria_44_11, Falkowbacteria, Parcubacteria, Bacteria

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9204..10640
DNA (1437bp) protein (479aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_44_11_curated
hypothetical protein id=13658 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
hypothetical protein
rifcsphigho2_02_scaffold_7708_trna_1
unknown

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comp(10646..10720)
DNA (75bp)
transferRNA
rifcsphigho2_02_scaffold_7708_10
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(10764..12104)
DNA (1341bp) protein (447aa)
algC; phosphomannomutase/phosphoglucomutase AlgC (EC:5.4.2.2 5.4.2.8)
Phosphomannomutase/phosphoglucomutase AlgC {ECO:0000313|EMBL:AIS51901.1}; EC=5.4.2.2 {ECO:0000313|EMBL:AIS51901.1};; EC=5.4.2.8 {ECO:0000313|EMBL:AIS51901.1};; TaxID=2325 species="Bacteria; Firmicutes
phosphomannomutase n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E304CE
rifcsphigho2_02_scaffold_7708_11

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comp(12106..12942)
DNA (837bp) protein (279aa)
nucleotidyltransferase; K00966 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]; K01840 phosphomannomutase [EC:5.4.2.8] id=5048689 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Mannose-1-phosphate guanylyltransferase, phosphomannomutase {ECO:0000313|EMBL:KHO45352.1}; EC=2.7.7.13 {ECO:0000313|EMBL:KHO45352.1};; EC=5.4.2.8 {ECO:0000313|EMBL:KHO45352.1};; TaxID=1579365 species=
mannose-1-phosphate guanylyltransferase (EC:2.7.7.13)
rifcsphigho2_02_scaffold_7708_12

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13186..13494
DNA (309bp) protein (103aa)
50S ribosomal protein L44E; K02929 large subunit ribosomal protein L44e id=5048709 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L44e {ECO:0000256|HAMAP-Rule:MF_01476}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
LSU ribosomal protein L44E
rifcsphigho2_02_scaffold_7708_13
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(13487..14038)
DNA (552bp) protein (184aa)
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
id=5050691 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
Displaying 14 items

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