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rifcsphigho2_12_scaffold_9558

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_9558_1
unknown

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comp(1..690)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YTW3_MELRP id=5103290 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6YTW3_MELRP Tax=AR20
hypothetical protein
rifcsphigho2_12_scaffold_9558_2
unknown

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comp(692..814)
DNA (123bp) protein (41aa)

This feature has no annotations

rifcsphigho2_12_scaffold_9558_3
GWA2_OD1_50_22_partial, Magasanikbacteria, Parcubacteria, Bacteria

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1051..1356
DNA (306bp) protein (102aa)
Putative uncharacterized protein Tax=GWA2_OD1_50_22_partial
Putative uncharacterized protein id=2598226 bin=GWC1_OD1_38_17 species=unknown genus=Methanocaldococcus taxon_order=Methanococcales taxon_class=Methanococci phylum=Euryarchaeota tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
hypothetical protein
rifcsphigho2_12_scaffold_9558_4

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comp(1435..2376)
DNA (942bp) protein (314aa)
tRNA-dihydrouridine synthase (DusB) {ECO:0000313|EMBL:AIF18642.1}; TaxID=1456522 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_83_G
tRNA-dihydrouridine synthase id=1986675 bin=GWD2_Clostridiales_32_19 species=Clostridium sp. ASF356 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
nifR3 family TIM-barrel protein
rifcsphigho2_12_scaffold_9558_5

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comp(2409..2795)
DNA (387bp) protein (129aa)
Resolvase, Holliday junction-type n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW94_METFV id=5103291 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Resolvase, Holliday junction-type
Resolvase, Holliday junction-type {ECO:0000313|EMBL:AJF62572.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_12_scaffold_9558_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(2809..3561)
DNA (753bp) protein (251aa)
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] Tax=RBG_13_Woesearchaeota_36_6_curated
gcd1; glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
gcd1; nucleoside-diphosphate-sugar pyrophosphorylase; K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=5241118 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_12_scaffold_9558_7
AR18, Woesearchaeaota, DPANN, Archaea

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comp(3616..3984)
DNA (369bp) protein (123aa)
hypothetical protein id=5046889 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
rifcsphigho2_12_scaffold_9558_8
AR17, Woesearchaeaota, DPANN, Archaea

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comp(4198..5676)
DNA (1479bp) protein (493aa)
lysS; lysyl-tRNA synthetase (EC:6.1.1.6); K04567 lysyl-tRNA synthetase, class II [EC:6.1.1.6] Tax=AR17
lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XP11_9BACT
rifcsphigho2_12_scaffold_9558_9
unknown

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comp(5833..7737)
DNA (1905bp) protein (635aa)

This feature has no annotations

rifcsphigho2_12_scaffold_9558_10

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comp(7844..8752)
DNA (909bp) protein (303aa)
RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] id=5046895 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO52320.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein
rifcsphigho2_12_scaffold_9558_11
AR9, Woesearchaeaota, DPANN, Archaea

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comp(8818..9147)
DNA (330bp) protein (110aa)
Putative uncharacterized protein Tax=AR9
rifcsphigho2_12_scaffold_9558_12
unknown

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comp(9307..9750)
DNA (444bp) protein (148aa)

This feature has no annotations

rifcsphigho2_12_scaffold_9558_13
AR4, Woesearchaeaota, DPANN, Archaea

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comp(9753..10733)
DNA (981bp) protein (327aa)
radical SAM domain-containing protein; K06935 id=5047462 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
radical SAM domain-containing protein; K06935 Tax=AR4
radical SAM domain-containing protein
rifcsphigho2_12_scaffold_9558_14

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10807..11619
DNA (813bp) protein (271aa)
Marine sediment metagenome DNA, contig: S01H1_S26584 {ECO:0000313|EMBL:GAG31371.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
Putative ATPase id=5800155 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
Displaying 14 items

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