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rifcsphigho2_12_scaffold_5310

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_5310_1
unknown

Not on your lists

1..567
DNA (567bp) protein (189aa)

This feature has no annotations

rifcsphigho2_12_scaffold_5310_2
unknown

Not on your lists

comp(540..1262)
DNA (723bp) protein (241aa)

This feature has no annotations

rifcsphigho2_12_scaffold_5310_3

Not on your lists

comp(1296..2696)
DNA (1401bp) protein (467aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM16996.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Peptidase S8 and S53 subtilisin kexin sedolisin id=5800235 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
peptidase C1A papain
rifcsphigho2_12_scaffold_5310_4
R_Gallionellales_59_110, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2899..5019)
DNA (2121bp) protein (707aa)
serine/threonine protein kinase id=16868264 bin=RBG_16_Aminicenantes_63_16_plus species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_16_plus organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate Resolve three similar GC_Cov Aminicentantes bins with ESOM
serine/threonine protein kinase Tax=RIFCSPLOWO2_02_FULL_Gallionellales_59_110_curated
serine/threonine protein kinase
rifcsphigho2_12_scaffold_5310_5
unknown

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comp(5067..5558)
DNA (492bp) protein (164aa)

This feature has no annotations

rifcsphigho2_12_scaffold_5310_6
unknown

Not on your lists

comp(5904..5993)
DNA (90bp) protein (30aa)

This feature has no annotations

rifcsphigho2_12_scaffold_5310_7
AR18, Woesearchaeaota, DPANN, Archaea

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comp(6086..6370)
DNA (285bp) protein (95aa)
id=5045744 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_12_scaffold_5310_8
AR18, Woesearchaeaota, DPANN, Archaea

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comp(6408..7016)
DNA (609bp) protein (203aa)
rps2P; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 id=5045743 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rps2P; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=AR18
30S ribosomal protein S2
rifcsphigho2_12_scaffold_5310_9

Not on your lists

comp(7160..7834)
DNA (675bp) protein (225aa)
TM helix repeat-containing protein id=5045740 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
TM helix repeat-containing protein {ECO:0000313|EMBL:KHO54407.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
Conserved TM helix repeat-containing protein
rifcsphigho2_12_scaffold_5310_10
unknown

Not on your lists

comp(7911..8678)
DNA (768bp) protein (256aa)

This feature has no annotations

rifcsphigho2_12_scaffold_5310_11
unknown

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8807..9052
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsphigho2_12_scaffold_5310_12

Not on your lists

comp(9049..9906)
DNA (858bp) protein (286aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK64103.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Peptidoglycan-associated outer membrane protein id=7716504 bin=BACIGN_2 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=BACIGN_2 organism_group=Unknown_CP
calcium-binding protein
rifcsphigho2_12_scaffold_5310_13
GWA2_OP11_46_7, Microgenomates, Bacteria

Not on your lists

comp(9947..10150)
DNA (204bp) protein (68aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] id=5045978 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
UPI000021CFC7 related cluster Tax=GWA2_OP11_46_7
hypothetical protein
rifcsphigho2_12_scaffold_5310_14
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10147..10923)
DNA (777bp) protein (259aa)
exosome complex RNA-binding protein Rrp42 (EC:3.1.13.-); K12589 exosome complex component RRP42 Tax=AR17
Ribosomal RNA-processing protein RRP42 id=5800801 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribosomal RNA-processing protein RRP42
rifcsphigho2_12_scaffold_5310_15
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10920..11627)
DNA (708bp) protein (236aa)
ribosomal RNA-processing protein RRP41/SKI6 (EC:3.1.13.-); K11600 exosome complex component RRP41 id=5045736 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ribosomal RNA-processing protein RRP41/SKI6 (EC:3.1.13.-); K11600 exosome complex component RRP41 Tax=AR18
exosome complex exonuclease Rrp41
rifcsphigho2_12_scaffold_5310_16

Not on your lists

comp(11624..12307)
DNA (684bp) protein (228aa)
exosome complex RNA-binding protein Rrp4; K03679 exosome complex component RRP4 id=5045735 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Exosome complex component Rrp4 {ECO:0000256|HAMAP-Rule:MF_00623}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
putative exosome complex RNA-binding protein 1
rifcsphigho2_12_scaffold_5310_17

Not on your lists


comp(12314..13015)
DNA (702bp) protein (234aa)
Ribosome maturation protein SDO1 homolog n=4 Tax=Methanocaldococcus RepID=SDO1_METJA id=5103843 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO52035.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
Ribosome maturation protein SDO1-like protein
rifcsphigho2_12_scaffold_5310_18
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13017..13736)
DNA (720bp) protein (240aa)
proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] id=5045733 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=AR18
Proteasome subunit alpha
rifcsphigho2_12_scaffold_5310_19
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13736..14083)
DNA (348bp) protein (116aa)
Ribonuclease P protein component 2 Tax=AR17
Ribonuclease P protein component 2 id=5800796 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_12_scaffold_5310_20
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(14206..16317)
DNA (2112bp) protein (704aa)
psp3; putative alkaline protease id=5044478 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
psp3; putative alkaline protease Tax=AR5
hypothetical protein
Displaying 20 items

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