ggKbase home page

rifcsphigho2_12_scaffold_14458

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_12_scaffold_14458_1
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

98..2452
DNA (2355bp) protein (785aa)
DNA mismatch repair protein MutS; K03555 DNA mismatch repair protein MutS Tax=AR17
DNA mismatch repair protein MutS id=5800545 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
mutS3; DNA mismatch repair protein MutS
rifcsphigho2_12_scaffold_14458_2
unknown

Not on your lists

2449..2943
DNA (495bp) protein (165aa)

This feature has no annotations

rifcsphigho2_12_scaffold_14458_3
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

2947..4647
DNA (1701bp) protein (567aa)
DNA mismatch repair protein MutL id=5800681 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
DNA mismatch repair protein MutL Tax=AR15
DNA mismatch repair protein MutL
rifcsphigho2_12_scaffold_14458_4
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

4676..6331
DNA (1656bp) protein (552aa)
transglutaminase-like superfamily protein id=5049708 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transglutaminase-like superfamily protein Tax=AR18
Transglutaminase protein
rifcsphigho2_12_scaffold_14458_5
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6328..6873)
DNA (546bp) protein (182aa)
seg id=5799725 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
seg Tax=AR15
rifcsphigho2_12_scaffold_14458_6
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

7251..8486
DNA (1236bp) protein (412aa)
DNA primase id=5050382 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c rbh
DNA primase Tax=AR18
hypothetical protein
rifcsphigho2_12_scaffold_14458_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

8630..9145
DNA (516bp) protein (172aa)
transmembrane_regions id=5044145 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
transmembrane_regions Tax=AR18
rifcsphigho2_12_scaffold_14458_8
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9129..9827)
DNA (699bp) protein (233aa)
16S rRNA (guanine(1405)-N(7))-methyltransferase id=5044147 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
16S rRNA (guanine(1405)-N(7))-methyltransferase Tax=AR18
rmtC
rifcsphigho2_12_scaffold_14458_9
GWA2_OD1_45_21, Giovannonibacteria, Parcubacteria, Bacteria

Not on your lists

9882..10247
DNA (366bp) protein (122aa)
Vitamin K epoxide reductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CCX5_THET1 id=5103515 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKU04011.1}; TaxID=1618649 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_45_21.;"
Vitamin K epoxide reductase
rifcsphigho2_12_scaffold_14458_10
unknown

Not on your lists

comp(10546..11082)
DNA (537bp) protein (179aa)

This feature has no annotations

Displaying 10 items

View Taxonomy