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rifoxyc2_full_scaffold_4515

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyc2_full_scaffold_4515_1
RIFOXYD2_FULL_Elusimicrobia_34_15_curated, Elusimicrobia, Bacteria

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comp(1..126)
DNA (126bp) protein (42aa)
HsdR family type I site-specific deoxyribonuclease; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] Tax=RIFOXYD2_FULL_Elusimicrobia_34_15_curated
HsdR family type I site-specific deoxyribonuclease n=1 Tax=Bacillus smithii 7_3_47FAA RepID=G9QNG1_9BACI
rifoxyc2_full_scaffold_4515_2

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comp(136..780)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PZQ0_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKL99216.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifoxyc2_full_scaffold_4515_3

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comp(777..1757)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=T0YIU1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD35321.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
rifoxyc2_full_scaffold_4515_4
unknown

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comp(1750..1851)
DNA (102bp) protein (34aa)

This feature has no annotations

rifoxyc2_full_scaffold_4515_5
AR19, Pacearchaeaota, DPANN, Archaea

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comp(1848..2348)
DNA (501bp) protein (167aa)
HEPN domain-containing protein Tax=AR19
hypothetical protein id=5041880 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifoxyc2_full_scaffold_4515_6
AR19, Pacearchaeaota, DPANN, Archaea

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comp(2338..2910)
DNA (573bp) protein (191aa)
DNA polymerase subunit beta Tax=AR19
DNA polymerase subunit beta id=5041879 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA polymerase subunit beta
rifoxyc2_full_scaffold_4515_7
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(2991..3137)
DNA (147bp) protein (49aa)
Type I restriction-modification system, specificity subunit S {ECO:0000313|EMBL:GAM14265.1}; EC=3.1.21.3 {ECO:0000313|EMBL:GAM14265.1};; TaxID=1321606 species="Bacteria; Firmicutes; Bacilli; Bacillale
HsdS protein n=1 Tax=Staphylococcus haemolyticus (strain JCSC1435) RepID=Q4LAF3_STAHJ
rifoxyc2_full_scaffold_4515_8
Treponema phagedenis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3127..3609)
DNA (483bp) protein (161aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=754027 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Trep
DNA (Cytosine-5-)-methyltransferase n=1 Tax=Treponema phagedenis F0421 RepID=E7NR78_TREPH
DNA-cytosine methyltransferase
rifoxyc2_full_scaffold_4515_9

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3951..4487
DNA (537bp) protein (179aa)
50S ribosomal protein L10e {ECO:0000256|HAMAP-Rule:MF_00448, ECO:0000256|SAAS:SAAS00015362}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
50S ribosomal protein L16; K02866 large subunit ribosomal protein L10e id=5044620 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
50S ribosomal protein L10e
rifoxyc2_full_scaffold_4515_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(4465..5448)
DNA (984bp) protein (328aa)
gtp1/obg family GTP-binding protein Tax=RBG_13_Woesearchaeota_36_6_curated
Small GTP-binding protein id=5800537 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
small GTP-binding protein
Displaying 10 items

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